DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhedup and trcs-1

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001369900.1 Gene:trcs-1 / 177791 WormBaseID:WBGene00009186 Length:428 Species:Caenorhabditis elegans


Alignment Length:112 Identity:33/112 - (29%)
Similarity:49/112 - (43%) Gaps:18/112 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LNVYRPKNRAEDKLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLSTGD 168
            :.||||.|........:::||||||..|:.....|..:.:....|.:.:::.|||.|       :
 Worm   109 VKVYRPTNNKTSTDGAVLFIHGGGFALGNVDMYDSLVKRMAYEMKTLFISIEYRLSP-------E 166

  Fly   169 EHMPGNFGFKDQRLALQWIQKHIATFGG-----DPKKVTVLGHSAGG 210
            ...||  |..|...|:.    |...||.     :..||.::|.||||
 Worm   167 TVFPG--GILDCEAAID----HFFDFGAVQFGVNTSKVVIMGDSAGG 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 33/112 (29%)
trcs-1NP_001369900.1 Abhydrolase_3 125..404 CDD:400284 28/96 (29%)

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