DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and Nlgn3

DIOPT Version :9

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_599163.2 Gene:Nlgn3 / 171297 RGDID:621119 Length:848 Species:Rattus norvegicus


Alignment Length:624 Identity:162/624 - (25%)
Similarity:250/624 - (40%) Gaps:139/624 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GCMRGTL--MPGYQSGEFEAFMGIPFAQPPVGPLRLKNPVPNEPWEGVLDAGAAKDSCIQRSYFA 90
            |.:||..  :|....|..:.::|:|:|.||:|..|...|.|...|.|:.:|......|.|..:.|
  Rat    49 GKLRGARVPLPSEILGPVDQYLGVPYAAPPIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTA 113

  Fly    91 KEWGLMGV-----------------EDCLYLNVYRP---------------------------KN 111
            ....::.|                 |||||||||.|                           |.
  Rat   114 VPEVMLPVWFTANLDIVATYIQEPNEDCLYLNVYVPTEDVKRISKECARKPNKKICRKGGSGAKK 178

  Fly   112 RAED----------------KLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGP 160
            :.||                ..|||||||||.:..|:.: |..| ..|.....|:::|:|||:|.
  Rat   179 QGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGN-MIDG-SVLASYGNVIVITLNYRVGV 241

  Fly   161 FGFLSTGDEHMPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGL 225
            .|||||||:...||:|..||..||:|:.::||.|||||:::||.|...|.....|..:|.:|:||
  Rat   242 LGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEGL 306

  Fly   226 FQNSMSLTGTMFLSAMKILKDPLSQARRLGKELAIDQAESLSSQDLAEALRNVCPKKLLVSVDSL 290
            ||.::..:|:. ||:..:...|:.....|..::.   ...|.:.|:.:.||....|:|:..    
  Rat   307 FQRAIIQSGSA-LSSWAVNYQPVKYTSLLADKVG---CNVLDTVDMVDCLRQKSAKELVEQ---- 363

  Fly   291 KVWDNMP---HLTTLPVLEAPSPDAFLVEDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRAFI 352
               |..|   |:...||::..    .:.:||......|..  :.:.:.|....|||..|: ...:
  Rat   364 ---DIQPARYHVAFGPVIDGD----VIPDDPEILMEQGEF--LNYDIMLGVNQGEGLKFV-EGVV 418

  Fly   353 NPK---LRAEFN---ENFLEHMALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLK-LAEISG 410
            :|:   ...:|:   .||:::   |...|||... :...|...|....|..|.:|..| |..:..
  Rat   419 DPEDGVSGTDFDYSVSNFVDN---LYGYPEGKDT-LRETIKFMYTDWADRDNPETRRKTLVALFT 479

  Fly   411 DFNFYYPIYETISSYVTYANLEENPLFIYIFEFAGLNSITKFFAGTTDDYGLGAVHMDDGLHTIR 475
            |..:..|...|...:..|.    :|.:.|.| :....|:.|  ...:|     |.|.|:..:...
  Rat   480 DHQWVEPSVVTADLHARYG----SPTYFYAF-YHHCQSLMK--PAWSD-----AAHGDEVPYVFG 532

  Fly   476 IPV--SFDDFPKD--SEDAKVIQRMSSLMTDFAKTG-----------VFHEESICKVSDFKEQGM 525
            :|:  ..|.||.:  ..|..:...:.:..|:|||||           ..|    .|.:.|:|...
  Rat   533 VPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIH----TKANRFEEVAW 593

  Fly   526 CN-------YLHFGGNKEKYLEDIRNSITLTAFPIWKKL 557
            ..       |||.|....     :|:....|....||.|
  Rat   594 SKYNPRDQLYLHIGLKPR-----VRDHYRATKVAFWKHL 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 COesterase 31..508 CDD:278561 148/563 (26%)
Aes <106..>210 CDD:223730 50/146 (34%)
Nlgn3NP_599163.2 COesterase 40..624 CDD:395084 159/619 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..195 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 645..691
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336083
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.