DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and Gli

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_061510245.1 Gene:Gli / 1277780 VectorBaseID:AGAMI1_001484 Length:973 Species:Anopheles gambiae


Alignment Length:452 Identity:133/452 - (29%)
Similarity:200/452 - (44%) Gaps:94/452 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GEFEAFMGIPFAQPPVGPLRLKNPVPNEPWEGV--LDAGAAKDSCIQRSYFAKEWGLMGV-EDCL 102
            |:...|:|||:|.||....|.|.|..:..|:.|  :|.|.|....:|  |.....|:..: ||||
Mosquito   180 GKCSTFLGIPYALPPTHEGRFKPPRQHRGWQLVQAVDYGPACPQPVQ--YTGATKGIRDMDEDCL 242

  Fly   103 YLNVYRPKNRA--EDKLPVMVYIHGGGFFSGSAHPMASGPEYLMDT-NKVVMVTMNYRLGPFGFL 164
            |||::.|..:|  ..:.|||:|||||.|..|:::..   |.:::.. ..||:||.|||||..|||
Mosquito   243 YLNIFSPNTQAGVAQRYPVMIYIHGGEFVRGASNTF---PGHMLAAFYDVVVVTFNYRLGALGFL 304

  Fly   165 STGDEHMPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGLFQNS 229
            |||||:.|||:|..||.:|::|:.::|.:|.||...:|:.|..|||.||.|.|::|.:|.:....
Mosquito   305 STGDENSPGNYGILDQIMAVRWVYENIESFNGDRNSITLFGPGAGGASAGLLMVAPQTKDIVTRV 369

  Fly   230 MSLTGTMFLSAMKILKDPLSQARRLGKELAIDQAESL-SSQDLAEALRNVCPKKLLVSVDSLKVW 293
            :..:|:. |:...::.|.. :|:...:..|.:...|: :|..:...:||......|.:.:.    
Mosquito   370 IGQSGSA-LADWALIVDKW-RAQNTSRVFAQNVGCSIETSWKMVNCMRNGRSSYELGNAEF---- 428

  Fly   294 DNMPHLTTL---PVLE----APSPD----------AFLVEDPLDAHRAGRINQMPWILSLSSRAG 341
              .||:...   ||||    .|...          .||.|.|....|....|:....:|      
Mosquito   429 --PPHVGLFPWGPVLENNFTFPGDSWYEGWSERDWHFLAETPESLIRRRHFNRGLHYMS------ 485

  Fly   342 EGSLFIMRAFI---NPKLRA--EFNENFLEHMALLLNLPEGTPVQMVSEILDAYDFKGDSLN-ND 400
             |......||:   |..|..  |.:|.|.:              |.|.|::..|::   :|| |.
Mosquito   486 -GVTLQEAAFVITGNKSLAPYFEVDERFFD--------------QKVRELVLRYNY---TLNLNG 532

  Fly   401 TMLKLAEISGDFNFYYPIYETISSYVTYANLEENPLFI---YIFEFAGLNSITKF-FAGTTD 458
            |                 ||.|....||....:|..||   ||      |.::.| :...||
Mosquito   533 T-----------------YEAIKYMYTYWPDPKNTTFIREQYI------NLLSDFLYRAPTD 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 133/452 (29%)
GliXP_061510245.1 None

Return to query results.
Submit another query.