DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhedup and Nlgn1

DIOPT Version :9

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_038957495.1 Gene:Nlgn1 / 116647 RGDID:621117 Length:863 Species:Rattus norvegicus


Alignment Length:678 Identity:175/678 - (25%)
Similarity:263/678 - (38%) Gaps:191/678 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GDSLDVCLEDMGCMRGTL--------------------MPGYQS-------GEFEAFMGIPFAQP 54
            |..|.:||  :||:..|.                    :.|.:.       |....|:|:|:|.|
  Rat    26 GAPLTLCL--LGCLLQTFHVLSQKLDDVDPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAP 88

  Fly    55 PVGPLRLKNPVPNEPWEGVLDAGAAKDSCIQR-----------------------SYFAKEWGLM 96
            |.|..|.:.|.|..||..:.:|......|.|.                       ||...:    
  Rat    89 PTGEHRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQ---- 149

  Fly    97 GVEDCLYLNVYRP------------------------------------KNRAEDK--------L 117
             .|||||||:|.|                                    .:||||:        .
  Rat   150 -SEDCLYLNIYVPTEDVKRISKECARKPGKKICRKGGPLTKTQTDDLGDNDRAEDEDIRDSGGPK 213

  Fly   118 PVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLSTGDEHMPGNFGFKDQRL 182
            |||||||||.:..|:.: :..| ..|.....|:::|:|||||..|||||||:...||:|..|...
  Rat   214 PVMVYIHGGSYMEGTGN-LYDG-SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQ 276

  Fly   183 ALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMI---------SPNSKGLFQNSMSLTGTMFL 238
            ||:|..::|..|||||.::||.|..|||...:|..:         |.::|||||.:::.:||. |
  Rat   277 ALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTA-L 340

  Fly   239 SAMKILKDPLSQARRLGKELAIDQAESLSSQDLAEALRNVCPKKLLVSVDSLKVWDNMPHLTTLP 303
            |:..:...|...||.|..::..:.::::   :|.|.|:.. |.|.||..|   |.....|:...|
  Rat   341 SSWAVSFQPAKYARILATKVGCNVSDTV---ELVECLQKK-PYKELVDQD---VQPARYHIAFGP 398

  Fly   304 VLEAPSPDAFLVEDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRAFINPK--LRAEFN---EN 363
            |::..    .:.:||......|..  :.:.:.|....|||..|:.....:..  ..::|:   .|
  Rat   399 VIDGD----VIPDDPQILMEQGEF--LNYDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFAVSN 457

  Fly   364 FLEHMALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLK-LAEISGDFNFYYPIYETISSYVT 427
            |:::   |...|||..| :...|...|....|..|.:|..| |..:..|..:..|...|      
  Rat   458 FVDN---LYGYPEGKDV-LRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPAVAT------ 512

  Fly   428 YANLEEN---PLFIYIFEFAGLNSITKFFAGTTDDY--GLGAVHMDDGLHTIRIPV--SFDDFPK 485
             |:|..|   |.:.|.|          :....||..  ...|.|.|:..:.:.||:  ..:.||.
  Rat   513 -ADLHSNFGSPTYFYAF----------YHHCQTDQVPAWADAAHGDEVPYVLGIPMIGPTELFPC 566

  Fly   486 D--SEDAKVIQRMSSLMTDFAKTG------------------VFHEESICKVSDFKEQGMCNYLH 530
            :  ..|..:...:.:..|:|||||                  .|.|.:..:.|. |:|   .|||
  Rat   567 NFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQ-KDQ---LYLH 627

  Fly   531 FGGNKEKYLEDIR-NSITLTAFPIWKKL 557
            . |.|.:..|..| |.:.|     |.:|
  Rat   628 I-GLKPRVKEHYRANKVNL-----WLEL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 COesterase 31..508 CDD:278561 153/612 (25%)
Aes <106..>210 CDD:223730 49/147 (33%)
Nlgn1XP_038957495.1 COesterase 52..646 CDD:395084 166/645 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336126
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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