DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and nlgn3

DIOPT Version :9

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_012823589.1 Gene:nlgn3 / 100329188 XenbaseID:XB-GENE-977261 Length:843 Species:Xenopus tropicalis


Alignment Length:628 Identity:166/628 - (26%)
Similarity:248/628 - (39%) Gaps:147/628 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GCMRGTL--MPGYQSGEFEAFMGIPFAQPPVGPLRLKNPVPNEPWEGVLDAGAAKDSCIQRSYFA 90
            |.:|||.  :|....|..:.::|:|:|.||||..|...|.|...|.|:.:|......|.|....|
 Frog    43 GKLRGTRVPLPSEILGPVDQYLGVPYAAPPVGEKRFLPPEPPPSWSGIRNATHFSPVCPQNIQNA 107

  Fly    91 KEWGLMGV-----------------EDCLYLNVYRP---------------------------KN 111
            ....:|.|                 |||||||:|.|                           |.
 Frog   108 VPDIMMPVWFTSNLDTVTGYLQEQSEDCLYLNIYVPTEDVKRISKECVRKPNKKICRKGGPSAKK 172

  Fly   112 RAED----------------KLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGP 160
            :.|:                ..|||||||||.:..||.: |..| ..|.....||::|:|||:|.
 Frog   173 QGEELSDNDEDEEGDIRDTGAKPVMVYIHGGSYMEGSGN-MIDG-SVLASYGNVVVITLNYRVGV 235

  Fly   161 FGFLSTGDEHMPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGL 225
            .|||||||:...||:|..||..||:|:.:::|.|||||.::||.|...|.....|..:|.:|:||
 Frog   236 LGFLSTGDQAAKGNYGLLDQIQALRWVSENVAFFGGDPHRITVFGSGIGASCVSLLTLSHHSEGL 300

  Fly   226 FQNSMSLTGTMFLSAMKILKDPLSQARRLGKELAIDQAESLSSQDLAEALRNVCPKKLLVSVDSL 290
            ||.::..:|:. ||:..:...|:...|.|.:::.   ...|.:.|:.:.||....|:|:..    
 Frog   301 FQRAIIQSGSA-LSSWAVNYQPVKYTRLLAEKVG---CNVLDTVDMVDCLRQKSAKELVEQ---- 357

  Fly   291 KVWDNMP---HLTTLPVLEAPSPDAFLVEDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRAFI 352
               |..|   |:...||::..    .:.:||......|..  :.:.:.|....|||..|:...  
 Frog   358 ---DIQPARYHVAFGPVIDGD----VIPDDPEILMEQGEF--LNYDIMLGVNQGEGLKFVENV-- 411

  Fly   353 NPKLRAE-------FN---ENFLEHMALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLK-LA 406
               :.||       |:   .||:::   |...|||... :...|...|....|..|.:|..| |.
 Frog   412 ---VDAEDGVSGSDFDYSVSNFVDN---LYGYPEGKDT-LRETIKFMYTDWADRDNPETRRKTLV 469

  Fly   407 EISGDFNFYYPIYETISSYVTYANLEENPLFIYIFEFAGLNSITKFFAGTTDDYGLGAVHMDDGL 471
            .:..|..:..|...|...:..|.    :|.:.|.| :....|:.|  ....|     |.|.|:..
 Frog   470 ALFTDHQWVEPSVVTADLHARYG----SPTYFYAF-YHHCQSLMK--PAWAD-----AAHGDEVP 522

  Fly   472 HTIRIPV--SFDDFPKD--SEDAKVIQRMSSLMTDFAKTG-----------VFHEESICKVSDFK 521
            :...:|:  ..|.||.:  ..|..:...:.:..|:|||||           ..|    .|.:.|:
 Frog   523 YVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIH----TKANRFE 583

  Fly   522 EQGMCN-------YLHFGGNKEKYLEDIRNSITLTAFPIWKKL 557
            |.....       |||.|....     :|:....|....||.|
 Frog   584 EVAWSKYNPRDQLYLHIGLKPR-----VRDHYRATKVAFWKHL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 COesterase 31..508 CDD:278561 152/567 (27%)
Aes <106..>210 CDD:223730 49/146 (34%)
nlgn3XP_012823589.1 COesterase 31..618 CDD:278561 163/623 (26%)
Aes <195..>302 CDD:223730 51/108 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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