DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhedup and nlgn1

DIOPT Version :9

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_017949302.2 Gene:nlgn1 / 100329186 XenbaseID:XB-GENE-6041753 Length:859 Species:Xenopus tropicalis


Alignment Length:688 Identity:177/688 - (25%)
Similarity:257/688 - (37%) Gaps:197/688 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGVLLFVAVAVGDSLD----VCLEDMGCMRG--------TLMPGYQSGEFEAFMGIPFAQPPVGP 58
            ||.||.:|......||    |.|...|.:||        .|.|..|      |:|:|:|.||:|.
 Frog    34 FGFLLHIATVRSQKLDDVDPVVLTTYGKVRGFKKELNNEILGPVVQ------FLGVPYAAPPIGE 92

  Fly    59 LRLKNPVPNEPWEGVLDAGAAKDSCIQR-----------------------SYFAKEWGLMGVED 100
            .|.:.|.|...|..:.::......|.|.                       ||...:     .||
 Frog    93 RRFQPPEPPTMWGDIKNSTQFAPVCPQNIVGGRLPEVMLPVWFTNNLDVVSSYVQDQ-----SED 152

  Fly   101 CLYLNVYRP------------------------------------KNRAEDK--------LPVMV 121
            |||||:|.|                                    ...|||:        .||||
 Frog   153 CLYLNIYVPTEDVKRISKECARKPGKKICRKEGPLTKKQTDDLGDNEGAEDEDIRDSGGPKPVMV 217

  Fly   122 YIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLSTGDEHMPGNFGFKDQRLALQW 186
            |||||.:..|:.:....  ..|.....|:::|:|||||..|||||||:...||:|..|...||:|
 Frog   218 YIHGGSYMEGTGNVFDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQASKGNYGLLDLIQALRW 280

  Fly   187 IQKHIATFGGDPKKVTVLGHSAGGISAHLHMI---------SPNSKGLFQNSMSLTGTMFLSAMK 242
            ..::|..|||||.::||.|..||....:|..:         |.::|||||.:::.:||. ||:..
 Frog   281 TSENIGFFGGDPLRITVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTA-LSSWA 344

  Fly   243 ILKDPLSQARRLGKELAIDQAESLSSQDLAEALRNVCPKKLLVSVDSLKVWDNMPHLTTLPVLEA 307
            :...|...||.|..::..:.::   |.:|.|.|:.. |.:.||..|...|   ..|:...||::.
 Frog   345 VSFQPAKYARILATKVGCNMSD---SGELVECLQKK-PYRELVDQDIQPV---RYHIAFGPVIDG 402

  Fly   308 PSPDAFLVEDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRAFINPK--LRAEFN---ENFLEH 367
            .    .:.:||......|..  :.:.:.|....|||..|:.....:..  ..::|:   .||:::
 Frog   403 D----VIPDDPQVLMEQGEF--LNYDIMLGVNQGEGLKFVESTVDHEDGVSSSDFDFAVSNFVDN 461

  Fly   368 MALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLK-LAEISGDFNFYYPIYETISSYVTYANL 431
               |....||..: :...|...|....|..|.:|..| |..:..|..:..|...|       |:|
 Frog   462 ---LYGYTEGKDI-LRETIKFMYTDWADRNNPETRRKTLLALFTDHQWVAPAVAT-------ADL 515

  Fly   432 EEN---PLFIYIFEFAGLNSITKFFAGTTDDYGLGAVHMDDGLHTIRIPVSF--------DDFPK 485
            ..|   |.:.|.|          :....||.....|    |..|...||..|        :.||.
 Frog   516 HSNFGSPTYFYAF----------YHHCQTDQVPAWA----DASHGDEIPYVFGIPMIGPTELFPC 566

  Fly   486 D--SEDAKVIQRMSSLMTDFAKTG------------------VFHEESICKVSDFKEQGMCNYLH 530
            :  ..|..:...:.:..|:|||||                  .|.|.:..:.|. |:|   .|||
 Frog   567 NFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQ-KDQ---LYLH 627

  Fly   531 FGGN---KEKY--------LE-----DIRNSITLTAFP 552
            .|..   ||.|        ||     .:.|.:|.|..|
 Frog   628 IGLKPRVKEHYRATKVNLWLELVPRLHVMNDLTTTKGP 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 COesterase 31..508 CDD:278561 149/597 (25%)
Aes <106..>210 CDD:223730 47/147 (32%)
nlgn1XP_017949302.2 COesterase 52..646 CDD:395084 164/649 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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