DRSC/TRiP Functional Genomics Resources

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Protein Alignment Asph and gpatch3

DIOPT Version :9

Sequence 1:NP_001261020.1 Gene:Asph / 36778 FlyBaseID:FBgn0034075 Length:991 Species:Drosophila melanogaster
Sequence 2:XP_005158511.1 Gene:gpatch3 / 791148 ZFINID:ZDB-GENE-070112-902 Length:688 Species:Danio rerio


Alignment Length:399 Identity:81/399 - (20%)
Similarity:136/399 - (34%) Gaps:99/399 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 EEDEPAADEEYEEDEDEENNAGENITAEDAEEEEEEEDNDDEGTVEATVE--ATTEATTEATGEY 213
            :.|.|......:..........|..||..|::        |..|:..|::  .||..|.:.|...
Zfish   237 QRDTPTTSHRKQGKPTTLYRTQETPTASQAKQ--------DTPTISLTIQDTPTTTQTNQDTPST 293

  Fly   214 EAEEDDEDEAAADDDAVESTEAPLSKAEEQEDDEDEDEEEQEIEESVEPERSQYAAQSAPAKDNN 278
            ..:..|...|:.......:|...|..:......:|.....|..:::  |..| ...|..|.....
Zfish   294 SCKIQDTPTASQRKQDTPTTSQKLDMSTTSCKIQDTPTASQRKQDT--PTTS-CIIQDTPTTSQT 355

  Fly   279 DDDDDDDQDKNDADDGDDDEFESLAQQFENDP-----EDTVPAKAVESEEQDQDQADEEEPKEEG 338
            ..|......|.|        ..:.:.:.::.|     :||.|...:..:.....|..:..|..  
Zfish   356 VQDTPTTSQKQD--------MSTTSCKIQDTPTASQRKDTPPTSCIIQDTPTASQRKDTPPTS-- 410

  Fly   339 SSWLASLAVKFGVGVALALVSRLVLIRKSPNTTEDEPAPETIFRRRLTIATAEDHIPDD------ 397
                                   .:|:.:|.|::         .:||...||...|.|.      
Zfish   411 -----------------------CIIQDTPTTSQ---------TKRLNTPTASRKIQDTPTYTQT 443

  Fly   398 -VEELP-PLDDEYSEEEIEIEEEIEVEISDIEEEEEEVRHDNDDNVASMASYVPETFEQLSAMYK 460
             .|:.| |..::.|:||              |.|||....|:||:..       |.:|:..|:::
Zfish   444 LYEDTPSPPVNQPSQEE--------------ESEEELSGPDDDDDRC-------EEWERHEALHE 487

  Fly   461 --YAQEPTKDAKPEQK-EKEPEKPVGHSDIYVEYEDGAIEDYEHDGVSDEEITDEED-EIS---D 518
              .|||.:|:...|:: |.:.||  |.|.: |.|.|......|.:|..||:..|:.| ::|   |
Zfish   488 DITAQERSKERLFEEEIELKWEK--GGSGL-VFYTDAQFWQEEEEGDFDEQTADDWDVDMSVYYD 549

  Fly   519 VDDADLMNR 527
            .|..|:.:|
Zfish   550 KDGGDMDSR 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsphNP_001261020.1 TPR 610..854 CDD:223533
TPR repeat 684..714 CDD:276809
TPR repeat 719..748 CDD:276809
TPR repeat 757..782 CDD:276809
Asp_Arg_Hydrox 826..977 CDD:282913
gpatch3XP_005158511.1 RRM_SF 12..>31 CDD:302621
G_patch 585..631 CDD:197727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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