DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asph and Lmpt

DIOPT Version :9

Sequence 1:NP_001261020.1 Gene:Asph / 36778 FlyBaseID:FBgn0034075 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster


Alignment Length:1075 Identity:219/1075 - (20%)
Similarity:354/1075 - (32%) Gaps:335/1075 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SESRFSKVFDGWVDEHRD--EHDGHDVQEPSGEALDDHDEHDDHDDHEDEEPL------------ 135
            ||.:..|:.:......|:  |.:..:.:|.....|:..:......::|::|.|            
  Fly   144 SEEQQRKLVEAERQREREQAEKELQEQREAERRQLEAEENQRKQRENEEKERLENERRLIDAERE 208

  Fly   136 TEELEEELEEEEEPTEEDEP-----AADEEYEEDEDEENNA-GENITAE-----------DAEEE 183
            .||.|..|:|.||..|.:|.     .|:.:.|:.|.|:..| .:.|.||           |||.:
  Fly   209 REENERRLQEAEEQREREESERRIVVAERQREQAEAEKERAEQQRILAEAEAAQAERRLFDAEIQ 273

  Fly   184 EEEEDNDDEG-------TVEATVEATTEATTEATGEYEAEEDD---------------------- 219
            .|.:..|:||       .||..:.|..|.:..|| |.|.|||.                      
  Fly   274 RERDQADEEGQALRDAEIVERLLAAERELSPSAT-ESELEEDAAIAEQSRRLISSRTDLEQKQRM 337

  Fly   220 -EDEA----AADDDAVESTEAPLSKAEEQEDDEDEDEEEQEIEE----SVEPER----------- 264
             |:.|    .|:::.|...:..|..:..:|:.::....|..:||    .|.|.|           
  Fly   338 IEENARRFLEAEEEMVMLQQRQLQASHSKEEADEYAGMEPVVEELCVKKVAPPRFQEPPEEPMVH 402

  Fly   265 ---SQYAAQSAPAKDNNDDDDDDDQDKNDADDGDDDEFESL-------AQQ--FENDPEDTVPAK 317
               :|:...|.|      :|....:.|.....|..||..||       .||  |...|.|  ...
  Fly   403 KVKTQFGQGSGP------EDAYSAKSKTLTFPGVSDEGSSLEPKTPFSIQQSSFSTQPSD--EGN 459

  Fly   318 AVESEEQDQDQADEEEPKEEGSSWLASLAVKFGVGVALALVSRLVLIRKSPNTTEDEPAPETIFR 382
            .:|||..:.:..|:.:..:....:|.||..                |:..|...||.......|:
  Fly   460 RIESERPEPEGEDQIQEVQYTEDYLRSLDG----------------IKNRPLMREDGSGRRRAFK 508

  Fly   383 RRLTIATAEDHIPDDVEELPPLDDEYSEEEIEIEEEIEVEISDIEEEEEEVRH-DNDDNVASMAS 446
            :|.:..::               :...|.....:||:::..|   .||||:|| |.:|       
  Fly   509 KRRSSGSS---------------NSSRESRASRDEELKMFTS---LEEEELRHGDRED------- 548

  Fly   447 YVPETFEQLSAMYKYAQEPTKDAKPEQKEK-EPEK---PVGHSDIYVEYEDGAIEDYEHDGVSDE 507
            |.|         .||..|||...|..::.| .|.|   |...|...:|             :..|
  Fly   549 YNP---------IKYTSEPTLRVKSHRRHKRSPAKDVRPTAESTTSLE-------------MLGE 591

  Fly   508 EITDEEDEI--SDVDDADLMNRLEAKYGRLPVKEFESDPDSDDPSWTQIKPKEAAPAPAEKEDPF 570
            |.|:...|:  ....|.:...|.:|    |.:.|.|.  :.:.||..:...:||...|  |...|
  Fly   592 ESTNPWGEVVPEHYKDTEFWKREKA----LSIDEEEI--ELERPSRGEDVEEEATNEP--KSSSF 648

  Fly   571 EQELRKANEEMIRENYAQALRSFNTLTTNFAHEPSAHLGRARLLELLAKK------ERSNQRLWE 629
            |:.....||:.:                            |.|.:.|:|:      |:.|.:..:
  Fly   649 EEATEAQNEQAV----------------------------AALKQQLSKEQLDKEAEKDNPQAVD 685

  Fly   630 AIDAYKRYLAFGELVASNQEFQTAGESCIENLRF--LGHH--RQATTIHELLINRLPEDPRLRNQ 690
            ..|:.|..|...  :|:.::.:........:.|.  :.|:  |.:.:..:..:.:.|  ||....
  Fly   686 TSDSNKSNLQTS--IAAEEQSRGGSPGLRRSPRMDEMEHYPERWSASQEQQSVQQQP--PRTAPA 746

  Fly   691 LSLTYLMVNNLQQVEKVAVETLKLWPNNAVAQLHYGL---ALRQFHADYAKALPYLKYAVESGEE 752
            :        |:||            |:.|..:..|||   .|..|:...|...|....:......
  Fly   747 I--------NVQQ------------PDTAPWRDQYGLLMEGLSDFYDFTASVNPSRSRSASRNPS 791

  Fly   753 GTQEAFFYLSLGETMQRLSMKSEALEVYG---KGVAKGFFASLYQRSLYNEPRLRAQPFWQPKET 814
            ...:....|..|:|       ..:||||.   :||..|              .|..:...|..|:
  Fly   792 PAPKNVANLMDGDT-------ERSLEVYDDTQEGVMAG--------------ELNCESVLQLLES 835

  Fly   815 GY-ERQLEKLTLNWRAIRDEGLALLGRSGFFEDEAELLRDKGVWQQYELYAQGR-----RVKDNC 873
            .. |.:.....|..:.:.|:  |..|:| ......|.|....:....|  .:||     |::...
  Fly   836 NLNETESTNDQLQVQTVADD--ARDGKS-ILPMVHEPLESSALGAVLE--ERGREPSVGRIQSRS 895

  Fly   874 R---RAPITCSLLEEFPESAGCRRGQV---KFSVMQAKTHVWPHCG-----PTNCRLRAHLTLAA 927
            |   |:|:..|  |...:|...||.::   ...:.:..:|..|...     ..|.||...|.:..
  Fly   896 RSRSRSPLPTS--ENLEKSIHKRRERLIKQNDELAERLSHSSPEDSMEIETSDNGRLSPTLEVTL 958

  Fly   928 PEP-----EKASLRVAEQERTWREGELFI--------------------------FDDSFE---- 957
            |:|     |.|...:.:.|.|..|..||:                          .:.|.|    
  Fly   959 PQPVIEINEMADEPMEDAETTPEEMRLFVETLRAERNARSRSRSRSRSPLPTAGNIEKSLESRRL 1023

  Fly   958 HEVWHNGSQSRLVLILDMWHPQLSAAQ--RRSLSP 990
            ..:.||..      |.:..|.|:|:.|  ..|.||
  Fly  1024 KRIQHNDE------IFEKLHDQMSSPQIIIESASP 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsphNP_001261020.1 TPR 610..854 CDD:223533 49/260 (19%)
TPR repeat 684..714 CDD:276809 5/29 (17%)
TPR repeat 719..748 CDD:276809 8/31 (26%)
TPR repeat 757..782 CDD:276809 7/27 (26%)
Asp_Arg_Hydrox 826..977 CDD:282913 38/201 (19%)
LmptNP_996113.2 GBP_C <103..201 CDD:303769 10/56 (18%)
ARGLU 110..255 CDD:291991 24/110 (22%)
coiled coil 170..181 CDD:293879 2/10 (20%)
coiled coil 190..201 CDD:293879 3/10 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.