DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RHO1

DIOPT Version :9

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_015491.1 Gene:RHO1 / 856294 SGDID:S000006369 Length:209 Species:Saccharomyces cerevisiae


Alignment Length:202 Identity:137/202 - (67%)
Similarity:162/202 - (80%) Gaps:12/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67
            :||:|||||||||||||||||||||.|||||||||||||||||:||||::|||||||||||||||
Yeast     8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72

  Fly    68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLA 132
            |||||||||::|:|:|||:|.||||||:.|||..||.|||..|||||||.|.||||||.||..|.
Yeast    73 RLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLR 137

  Fly   133 KMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVK------------KRK 185
            :..|:||..|||:::|::|.|..|.|||||:..|||:|||.||||:|..|            ::|
Yeast   138 QEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTNGKAKKNTTEKK 202

  Fly   186 KTRCLLL 192
            |.:|:||
Yeast   203 KKKCVLL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 129/173 (75%)
RHO1NP_015491.1 RhoA_like 10..184 CDD:206662 129/173 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 267 1.000 Domainoid score I285
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 279 1.000 Inparanoid score I569
Isobase 1 0.950 - 0 Normalized mean entropy S71
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000943
OrthoInspector 1 1.000 - - oto100226
orthoMCL 1 0.900 - - OOG6_101682
Panther 1 1.100 - - LDO PTHR24072
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1096
SonicParanoid 1 1.000 - - X549
TreeFam 1 0.960 - -
1312.800

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