DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RHO3

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_012148.1 Gene:RHO3 / 854688 SGDID:S000001380 Length:231 Species:Saccharomyces cerevisiae


Alignment Length:217 Identity:102/217 - (47%)
Similarity:132/217 - (60%) Gaps:28/217 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68
            |.:|:||:||||||||.||.||::..|||||.|||||||:.||.||.|.:.|:||||||||::||
Yeast    15 IERKIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDR 79

  Fly    69 LRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND--------P 125
            ||.|||.||..|::|||:||.|||||:..||..|:...|..|.::||..|.||||:        |
Yeast    80 LRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITP 144

  Fly   126 NTIRDLAKMKQEP-------------VKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRA 177
            |.|:....:..:.             :..:||.|||:||.|..|||||||..:||.:.|..|.|.
Yeast   145 NNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAARV 209

  Fly   178 AL-------QVKKRKKTRCLLL 192
            ||       :||....:.|.::
Yeast   210 ALTAGPVATEVKSDSGSSCTIM 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 96/194 (49%)
RHO3NP_012148.1 Rho3 17..231 CDD:206706 101/213 (47%)

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