DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RAC3

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_195228.1 Gene:RAC3 / 829654 AraportID:AT4G35020 Length:198 Species:Arabidopsis thaliana


Alignment Length:189 Identity:93/189 - (49%)
Similarity:123/189 - (65%) Gaps:16/189 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|.|||||.|||||||.::.:.||..||||||:|:.|::.|||..:.|.||||||||||:||||
plant     8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQEDYNRLRP 72

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND-------PNTIR 129
            |||...||.|:.||:.|..|.||:.:||.||::|:.|.|||||||.|.|||:|       |..: 
plant    73 LSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAV- 136

  Fly   130 DLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTR 188
                    |:...:|..:.:.|.|.||:|||||:::.|:.||:.|.:..||..|.||.:
plant   137 --------PISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQPPKNKKKK 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 88/178 (49%)
RAC3NP_195228.1 Rop_like 6..178 CDD:206705 88/178 (49%)

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