DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and ROP10

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_566897.1 Gene:ROP10 / 823959 AraportID:AT3G48040 Length:208 Species:Arabidopsis thaliana


Alignment Length:193 Identity:89/193 - (46%)
Similarity:127/193 - (65%) Gaps:11/193 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|.|||||.||||:||.::.::||..|:||||:|:..::.|:|..|.|.||||||||||:||||
plant    10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDTAGQEDYNRLRP 74

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |||...||.::.||:.|..|.||:.:||.||::||.|.|||:|||.|.|||.|.:.:.|...:  
plant    75 LSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMDLREDRHYLSDHPGL-- 137

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL-------QVKKRKKTR--CL 190
            .||...:|..:.:.|.|..|:|||:|:::.|:.||:.|.:..:       :.||::|.|  ||
plant   138 SPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIKPAVKQKEKKKKQKPRSGCL 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 83/171 (49%)
ROP10NP_566897.1 Rop_like 8..180 CDD:206705 83/171 (49%)

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