DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and Rhoh

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001074574.1 Gene:Rhoh / 74734 MGIID:1921984 Length:191 Species:Mus musculus


Alignment Length:184 Identity:76/184 - (41%)
Similarity:110/184 - (59%) Gaps:7/184 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||.|.|||.||:.|:.:.|||.|.|||:||...|:.:||.|:.|.||||||.:.:..:||
Mouse     6 KCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRP 70

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |||...||:|||:||.:.:|..|:..||..|::...|..|:::|..:.|.       |::...:.
Mouse    71 LSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQ-------REVGPHRA 128

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTRCL 190
            ..:...||:.:|:.:.|..||||||.|..||:.|||.|.|.|:...:|:..|.|
Mouse   129 SCINAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRKL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 72/171 (42%)
RhohNP_001074574.1 Rho 5..169 CDD:206641 71/169 (42%)
Effector region. /evidence=ECO:0000250 33..41 5/7 (71%)
Interaction with ZAP70. /evidence=ECO:0000269|PubMed:17028588 73..86 7/12 (58%)

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