DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and Rhobtb1

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001074816.1 Gene:Rhobtb1 / 69288 MGIID:1916538 Length:695 Species:Mus musculus


Alignment Length:196 Identity:69/196 - (35%)
Similarity:106/196 - (54%) Gaps:26/196 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLL------IVFSKDQFPEVYVPTVF--ENYVADIE--------VDGKQVEL 55
            |.|:|||.|.|||.|:      ...::.|....:||||:  :.|....|        ||...:.|
Mouse    16 KCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSISL 80

  Fly    56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120
            .||||.|  |:.:.|..:|..:||:::|||:.:|:||.::...|..|:|||||..|::|||.:.|
Mouse    81 RLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVGCQLD 143

  Fly   121 LR-NDPNTIRDLAKMKQEPVK------PQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAA 178
            || .|...:....:....|:|      |::||.:|::: ...|.|.|...:.|::|||:.|.|||
Mouse   144 LRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKEL-GIPYYETSVFDQFGIKDVFDNAIRAA 207

  Fly   179 L 179
            |
Mouse   208 L 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 67/194 (35%)
Rhobtb1NP_001074816.1 Rho-like 1..210 69/196 (35%)
RhoBTB 13..207 CDD:133275 66/193 (34%)
BTB_POZ 248..459 CDD:453885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..351
BTB_POZ 464..589 CDD:453885
BACK_RHOBTB1 592..691 CDD:350605
Blue background indicates that the domain is not in the aligned region.

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