DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhobtb3

DIOPT Version :9

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_691270.6 Gene:rhobtb3 / 562804 ZFINID:ZDB-GENE-091204-190 Length:619 Species:Danio rerio


Alignment Length:107 Identity:25/107 - (23%)
Similarity:47/107 - (43%) Gaps:11/107 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE----VKHFCPNVPIIL--VG 116
            ||.. ..|:..:|.: ....|::::.:||:...:.:.:...:.|.    ::|:  .||:||  ||
Zfish    81 WDIL-DSDWVSVRSI-LEQADIVVIKYSVNDKLAFQQVRNGYAPRLRPLLRHW--GVPVILVAVG 141

  Fly   117 NKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLE 158
            .:.:....|.|....|......|...||..::..:.| .|||
Zfish   142 ARLNDEGPPCTCPLCASDWSSCVPHSEGLQLSRDLGA-TYLE 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 25/107 (23%)
rhobtb3XP_691270.6 P-loop_NTPase <97..189 CDD:304359 21/89 (24%)
BTB 254..>296 CDD:295341
BTB 417..518 CDD:279045
BTB 428..518 CDD:197585
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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