DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhobtb3

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_691270.6 Gene:rhobtb3 / 562804 ZFINID:ZDB-GENE-091204-190 Length:619 Species:Danio rerio


Alignment Length:107 Identity:25/107 - (23%)
Similarity:47/107 - (43%) Gaps:11/107 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE----VKHFCPNVPIIL--VG 116
            ||.. ..|:..:|.: ....|::::.:||:...:.:.:...:.|.    ::|:  .||:||  ||
Zfish    81 WDIL-DSDWVSVRSI-LEQADIVVIKYSVNDKLAFQQVRNGYAPRLRPLLRHW--GVPVILVAVG 141

  Fly   117 NKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLE 158
            .:.:....|.|....|......|...||..::..:.| .|||
Zfish   142 ARLNDEGPPCTCPLCASDWSSCVPHSEGLQLSRDLGA-TYLE 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 25/107 (23%)
rhobtb3XP_691270.6 P-loop containing Nucleoside Triphosphate Hydrolases <80..195 CDD:476819 25/107 (23%)
BTB_POZ 244..406 CDD:453885
BTB2_POZ_RHOBTB3 417..526 CDD:349669
BACK_RHOBTB3 536..619 CDD:350607
Blue background indicates that the domain is not in the aligned region.

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