DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhobtb4

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001352487.1 Gene:rhobtb4 / 553415 ZFINID:ZDB-GENE-060315-11 Length:729 Species:Danio rerio


Alignment Length:196 Identity:73/196 - (37%)
Similarity:108/196 - (55%) Gaps:26/196 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLL------IVFSKDQFPEVYVPTVF--ENYVADIE--------VDGKQVEL 55
            |.|:|||.|.|||.|:      ...::.|....:||||:  :.|....|        ||...|.|
Zfish    29 KCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSVSL 93

  Fly    56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120
            .||||.|  |:.:.|..:|..:||:::|||:.:|:||.::...|.||:|||||..||||||.:.|
Zfish    94 RLWDTFG--DHHKDRRFAYGRSDVVVLCFSLANPNSLRHVRTMWFPEIKHFCPRTPIILVGCQLD 156

  Fly   121 LR-NDPNTIRDLAKMKQEPVK------PQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAA 178
            || .|.:.:....:...:|:|      |:.|..:|:::.. .|.|.|..::.||:|||:.|.|||
Zfish   157 LRYADLDAVNRARRPLAKPIKPTDILPPERGHEVAKELGV-PYYETSIVAQFGVKDVFDNAIRAA 220

  Fly   179 L 179
            |
Zfish   221 L 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 71/194 (37%)
rhobtb4NP_001352487.1 RhoBTB 26..220 CDD:133275 70/193 (36%)
BTB_POZ 259..489 CDD:453885
BTB_POZ 494..619 CDD:453885
BACK_RHOBTB2 622..718 CDD:350606
Blue background indicates that the domain is not in the aligned region.

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