DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhoa.2

DIOPT Version :9

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001016648.1 Gene:rhoa.2 / 549402 XenbaseID:XB-GENE-1019548 Length:193 Species:Xenopus tropicalis


Alignment Length:193 Identity:163/193 - (84%)
Similarity:177/193 - (91%) Gaps:1/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65
            |..||||||||||||||||||||:|||||||||||||||||||||||||.|||||||||||||||
 Frog     1 MAAIRKKLVIVGDGACGKTCLLIMFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQED 65

  Fly    66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRD 130
            ||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||.:|.|:
 Frog    66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRE 130

  Fly   131 LAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKK-RKKTRCLLL 192
            |||||||||:.:|||.||.:|:||.|||||||:.:|||:|||.|||||||.|: ||:..|.|:
 Frog   131 LAKMKQEPVRAEEGRDMANRISAFGYLECSAKTNDGVREVFEMATRAALQAKRGRKRNTCCLV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 153/173 (88%)
rhoa.2NP_001016648.1 RhoA_like 5..179 CDD:206662 153/173 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 329 1.000 Domainoid score I1171
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 350 1.000 Inparanoid score I2227
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1166960at2759
OrthoFinder 1 1.000 - - FOG0000943
OrthoInspector 1 1.000 - - otm49337
Panther 1 1.100 - - O PTHR24072
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X549
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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