DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RHOH

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_004301.1 Gene:RHOH / 399 HGNCID:686 Length:191 Species:Homo sapiens


Alignment Length:184 Identity:77/184 - (41%)
Similarity:110/184 - (59%) Gaps:7/184 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||.|.|||.||:.|:.:.|||.|.|||:||...|:.:||.|:.|.||||||.:.:..:||
Human     6 KCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRP 70

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |||...||:|||:||.:.:|..|:..||..|::...|..|:::|..:.|.       |::...:.
Human    71 LSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ-------REMGPHRA 128

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTRCL 190
            ..|...||:.:|:.:.|..||||||.|..||:.|||.|.|.|:...:|:..|.|
Human   129 SCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRRL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 73/171 (43%)
RHOHNP_004301.1 Rho 5..169 CDD:206641 72/169 (43%)
Effector region. /evidence=ECO:0000250 33..41 5/7 (71%)
Interaction with ZAP70. /evidence=ECO:0000250 73..86 7/12 (58%)

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