DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RND3

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_005159.1 Gene:RND3 / 390 HGNCID:671 Length:244 Species:Homo sapiens


Alignment Length:191 Identity:94/191 - (49%)
Similarity:134/191 - (70%) Gaps:6/191 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68
            ::.|:|:|||..||||.||.||:||.|||.|||||||||.|..|:|.:::||:||||:|...||.
Human    22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDN 86

  Fly    69 LRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAK 133
            :|||||||:|.:|:||.:..|::|:::.:||..|::.||||..::|||.|.|||.|.:|:.:|:.
Human    87 VRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSN 151

  Fly   134 MKQEPVKPQEGRAMAEKINAFAYLECSA-KSKEGVRDVFETATRAAL-----QVKKRKKTR 188
            .:|.||...:|..||::|.|..|:|||| :|:..|||:|..||.|.:     .||:.|..|
Human   152 HRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNKSQR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 90/174 (52%)
RND3NP_005159.1 Rnd3_RhoE_Rho8 19..200 CDD:206735 90/177 (51%)
Effector region. /evidence=ECO:0000255 52..60 7/7 (100%)

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