DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhoq

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956112.1 Gene:rhoq / 327510 ZFINID:ZDB-GENE-030131-5721 Length:205 Species:Danio rerio


Alignment Length:193 Identity:97/193 - (50%)
Similarity:139/193 - (72%) Gaps:5/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67
            :|..|.|:|||||.||||||:.::.|.|||.||||||::|...:.|.|||..|.|:|||||||||
Zfish     7 SIMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71

  Fly    68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLA 132
            ||||||||.|||.|:||||.:|.|.:|:.|:|.||::.:.||:|.:|:|.:.|||:||.||..|.
Zfish    72 RLRPLSYPMTDVFLICFSVVNPASFQNVREEWVPELQEYAPNIPYLLIGTQIDLRDDPKTIAKLN 136

  Fly   133 KMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL-----QVKKRKKTRCL 190
            .:|::|:..::|:.:|::|.|..|:||||.:::|::.||:.|..|.|     .:|:|...||:
Zfish   137 DVKEKPIVTEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILAPKKGALKRRLGPRCI 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 91/173 (53%)
rhoqNP_956112.1 P-loop containing Nucleoside Triphosphate Hydrolases 10..183 CDD:476819 91/172 (53%)

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