DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RHOD

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_055393.1 Gene:RHOD / 29984 HGNCID:670 Length:210 Species:Homo sapiens


Alignment Length:178 Identity:96/178 - (53%)
Similarity:121/178 - (67%) Gaps:0/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |:|:||||.||||.||:||:...|||.|.|||||.|:.:::|.||.|.|.:||||||:|||||||
Human    19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRP 83

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |.|||..|:|:||.|.||:|.:||..:|.|||.|||..||||:||.|.|||.|.:.:..|.:...
Human    84 LFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKSLVNKLRRNGL 148

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKR 184
            |||....|:.||..:.|.|||||||:..:.|..||:.|...||..:.|
Human   149 EPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 93/171 (54%)
RHODNP_055393.1 Rho4_like 16..210 CDD:206704 96/178 (54%)

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