DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rho1 and Rhov

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_011237767.1 Gene:Rhov / 228543 MGIID:2444227 Length:281 Species:Mus musculus


Alignment Length:195 Identity:87/195 - (44%)
Similarity:125/195 - (64%) Gaps:12/195 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.||:.|::.::.:.:|..|.||..:.:...:.|||..|.:.|||||||||:||||.
Mouse    78 KCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRS 142

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |.||||||.|.||||..|.|.:||.|||.||::...|..|::|||.:.|||:|.|.:..|.:..:
Mouse   143 LCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGR 207

  Fly   137 E-PVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKR--KK---------TRC 189
            | ||...:.:.:||||.|..||||||.:::.:::||::|..:|::.|.|  ||         :||
Mouse   208 EGPVPQPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAIEHKARLEKKLNAKGVRTLSRC 272

  Fly   190  189
            Mouse   273  272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 80/172 (47%)
RhovXP_011237767.1 Wrch_1 77..250 CDD:133330 80/171 (47%)

Return to query results.
Submit another query.