DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and Rac1

DIOPT Version :9

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001334459.1 Gene:Rac1 / 19353 MGIID:97845 Length:211 Species:Mus musculus


Alignment Length:208 Identity:114/208 - (54%)
Similarity:140/208 - (67%) Gaps:23/208 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.|||||||.::.:.||..|:||||:||.|::.||||.|.|.|||||||||||||||
Mouse     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRP 69

  Fly    72 LSYPDT-------------------DVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117
            ||||.|                   ||.|:|||:.||.|.||:..||.|||:|.|||.||||||.
Mouse    70 LSYPQTVGDTCGKDRPSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGT 134

  Fly   118 KKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL--- 179
            |.|||:|.:||..|.:.|..|:...:|.|||::|.|..||||||.::.|::.||:.|.||.|   
Mouse   135 KLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 199

  Fly   180 QVKKRKKTRCLLL 192
            .|||||: :||||
Mouse   200 PVKKRKR-KCLLL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 104/190 (55%)
Rac1NP_001334459.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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