DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and crp-1

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_505688.1 Gene:crp-1 / 179462 WormBaseID:WBGene00012532 Length:187 Species:Caenorhabditis elegans


Alignment Length:194 Identity:74/194 - (38%)
Similarity:113/194 - (58%) Gaps:20/194 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |||:|||...|||.||:.::|.||.:.|..|||:|:...:.:|.|...:.|:|||||.:|:::|.
 Worm     6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGNYEQIRC 70

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDP---NTI-RDL 131
            ||||..:|.|:|||:....:||:....|.||::.:. .||||:|||.|.||.:|.   ||: .|.
 Worm    71 LSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVTEDY 135

  Fly   132 AKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTR---CLLL 192
            ||            .:|.:|....:..|||.:.:|::.||:.:..||:.||..::|.   |.:|
 Worm   136 AK------------RVAHEIGCHKFYSCSALTHKGLKRVFDESFLAAVGVKLEEETPNPCCTIL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 68/176 (39%)
crp-1NP_505688.1 Rho 5..169 CDD:206641 67/174 (39%)

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