DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and ced-10

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_500363.1 Gene:ced-10 / 177111 WormBaseID:WBGene00000424 Length:191 Species:Caenorhabditis elegans


Alignment Length:187 Identity:104/187 - (55%)
Similarity:137/187 - (73%) Gaps:1/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.|||||||.::.:.||..|:||||:||.|::.|||:.:.|.|||||||||||||||
 Worm     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRP 69

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            ||||.|||.|:||::::|.|.||:..||.|||.|.|||.||||||.|.|||.|.:|:..|.:.:.
 Worm    70 LSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTVERLRERRL 134

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKR-KKTRCLLL 192
            :||...:|..||::|.|..||||||.::.|::.||:.|.||.|...:| ||::|.:|
 Worm   135 QPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 98/171 (57%)
ced-10NP_500363.1 Rac1_like 3..176 CDD:206663 97/170 (57%)

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