DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rho1 and RhoBTB

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_061508134.1 Gene:RhoBTB / 1277081 VectorBaseID:AGAMI1_009525 Length:761 Species:Anopheles gambiae


Alignment Length:210 Identity:81/210 - (38%)
Similarity:108/210 - (51%) Gaps:36/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIV------FSKDQFPEVYVPTV-----FENYVADIE-----VDGKQVEL 55
            |.|:|||.|.|||.|:..      .|..|....:||||     :..|...:|     |||..|.|
Mosquito    12 KCVLVGDTAVGKTRLICARACNKHVSLSQLLNTHVPTVWAIDQYRIYKDVLERSWEIVDGVNVSL 76

  Fly    56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120
            .||||.|  |:|:.|..:|..:||:|:|||:.:|.||.|....|.||::.|||:.|:||||.|.|
Mosquito    77 RLWDTFG--DHDKDRRFAYGRSDVVLLCFSIANPVSLRNCRAMWYPEIRKFCPDTPVILVGCKND 139

  Fly   121 LRNDPNTIRD--------------LAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVF 171
            ||   ...||              .|..|.:.|.|.|.||:|:::.. ||.|.|..:..||.:||
Mosquito   140 LR---YMYRDETYLSYFGERSPFVRAARKSDLVMPDEARAVAKELGV-AYYETSVFTYFGVNEVF 200

  Fly   172 ETATRAALQVKKRKK 186
            |.|.||||..::..:
Mosquito   201 ENAIRAALIARREHR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 79/201 (39%)
RhoBTBXP_061508134.1 None

Return to query results.
Submit another query.