DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhoq

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_031757763.1 Gene:rhoq / 100497782 XenbaseID:XB-GENE-492072 Length:205 Species:Xenopus tropicalis


Alignment Length:189 Identity:97/189 - (51%)
Similarity:137/189 - (72%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.||||||:.::.|.|||.||||||::|...:.|.|:|..|.|:|||||||||||||
 Frog    11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGRQYLLGLYDTAGQEDYDRLRP 75

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            ||||.|||.|:||||.:|.|.:|:.|:|.||:|.:.||||.:|||.:.|||:||.|:..|..:|:
 Frog    76 LSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLVGTQIDLRDDPKTLAKLNDVKE 140

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL-----QVKKRKKTRCL 190
            :|:..::|..:|::|.|..|:||||.:::|::.||:.:..|.|     .:|||..:||:
 Frog   141 KPITVEQGHKLAKEIGACCYVECSALTQKGLKTVFDESIIAILTPKKTAMKKRLGSRCI 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 91/171 (53%)
rhoqXP_031757763.1 Tc10 10..183 CDD:206707 91/171 (53%)

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