DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhoh

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001120435.1 Gene:rhoh / 100145522 XenbaseID:XB-GENE-950965 Length:190 Species:Xenopus tropicalis


Alignment Length:181 Identity:76/181 - (41%)
Similarity:111/181 - (61%) Gaps:8/181 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||.|.|||.||:.|:.:.||:.|.|||:||...|:.:||.|:.|.||||||.:.:..:||
 Frog     5 KCVLVGDAAVGKTALLVRFTSEAFPDSYRPTVYENTGVDVYMDGVQISLGLWDTAGNDAFRSIRP 69

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            ||..:.|::|:||||.:..|..|:..||..||:...|.:|:::|..:.|.       |:|..|:.
 Frog    70 LSLQNADIVLLCFSVANHTSFLNVRNKWIGEVRQHLPRIPVLVVATQTDQ-------RELDHMRL 127

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL-QVKKRKK 186
            ..:...:|:.:|:.:.|..||||||.|..||:.|||.|.|.|: |.|||.:
 Frog   128 PCINSIDGKQLAQDVRAKGYLECSALSNRGVQQVFECAVRTAINQAKKRAR 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 71/171 (42%)
rhohNP_001120435.1 Rho 4..168 CDD:206641 70/169 (41%)

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