DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhoj

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_017952315.1 Gene:rhoj / 100125013 XenbaseID:XB-GENE-957540 Length:214 Species:Xenopus tropicalis


Alignment Length:192 Identity:97/192 - (50%)
Similarity:138/192 - (71%) Gaps:3/192 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTIRK--KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63
            |:::::  |.|:|||||.||||||:.::.|.|||.||||||::|...|.|.|||..|.|:|||||
 Frog    15 MSSMKRMLKCVVVGDGAVGKTCLLMSYANDAFPEQYVPTVFDHYAVTITVGGKQYLLGLYDTAGQ 79

  Fly    64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTI 128
            ||||:|||||||:|||.|:||||.:|.|..|:.|:|..|::...|:||.:|:|.:.|||:||.|:
 Frog    80 EDYDQLRPLSYPNTDVFLICFSVVNPASYHNVHEEWVSELRACMPHVPYVLIGTQIDLRDDPITL 144

  Fly   129 RDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTRCL 190
            ..|..||::|:..::|..:|:.|.|..||||||.:::|:::||:.|.......|| ||.||:
 Frog   145 ARLLHMKEKPITQEQGMKLAKMIGAQCYLECSALTQKGLKNVFDEAILTVFHPKK-KKRRCV 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 90/175 (51%)
rhojXP_017952315.1 Tc10 22..195 CDD:206707 90/172 (52%)

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