DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhov

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001122131.1 Gene:rhov / 100038217 XenbaseID:XB-GENE-489435 Length:240 Species:Xenopus tropicalis


Alignment Length:178 Identity:78/178 - (43%)
Similarity:121/178 - (67%) Gaps:0/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.|||.|:|.::.:.:|..|.||..:.:...:.|||..|.:.|.|||||||:|.||.
 Frog    38 KCVLVGDGAVGKTSLVISYTINGYPTEYQPTALDTFSVQVLVDGAPVRIQLCDTAGQEDFDHLRS 102

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |.|.:|||.|:||||.:|.|.:|:.|||.||::...|:.||:|||.:.|||:|.|.:.:|::...
 Frog   103 LCYAETDVFLVCFSVVNPSSFQNVTEKWIPEIRTHSPHTPIVLVGTQADLRDDVNVLINLSRSHV 167

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKR 184
            :||...:.:|:|:||.|..|:||||.:::.:::||:.:..:|::.|.|
 Frog   168 KPVSESQAQAVAQKIRAQTYIECSALTQKNLKEVFDASILSAIKHKAR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 75/171 (44%)
rhovNP_001122131.1 Wrch_1 37..209 CDD:133330 75/170 (44%)

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