DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8414 and clpf-1

DIOPT Version :10

Sequence 1:NP_611084.2 Gene:CG8414 / 36774 FlyBaseID:FBgn0034073 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_001040858.1 Gene:clpf-1 / 175442 WormBaseID:WBGene00010304 Length:428 Species:Caenorhabditis elegans


Alignment Length:443 Identity:98/443 - (22%)
Similarity:175/443 - (39%) Gaps:120/443 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   540 LNKNFTRAQLDRIKTSFQRQTNAIVLLHRNTSAQQLVDTFGKHMAQNVFPLVNSSNRPFGQSETL 604
            |||.:|.....|: .:|..:...|.|:....||         ::|::. |:|...|         
 Worm    45 LNKKYTFPAKSRV-AAFTWKGATIELVGTTESA---------YVAEST-PMVIYLN--------- 89

  Fly   605 LHCLIQSSDQSRTLQVPQVWNKLQMHATSRIIVAGGKGVGKSSLLRYLINRNLGQFPSMLLIDLD 669
            :|..::...:.|..|.....||.:   ..|:::.|...|||:::.|.|.|.::.|..:.:.::||
 Worm    90 IHAAMEEVRKKREEQAAGNSNKAK---GPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELD 151

  Fly   670 IGQPEIFVPQTISCTVIDEPL-LGPGFLYNRQPEHAIV--VGHT----NIVLCAEQYARAVIQLV 727
            :||..:.||.|::..::.:.. :..||..| ||   ||  .|||    |:.|....:......|.
 Worm   152 VGQNSVSVPGTVAAVLVQKTADVIDGFERN-QP---IVFNFGHTSPSANLSLYEALFKEMATTLN 212

  Fly   728 QNIQ--NDAKYSNIPWLINTMGYNKGFGIELMALLVDRIRPTDLVQIASPIPINNFDSVLDR--- 787
            ..||  ::||...:  :|||.|:..|.|.:.            :|:.||...: :...|||.   
 Worm   213 AQIQENDEAKIGGM--IINTCGWVDGEGYKC------------IVKAASAFEV-DVVIVLDHERL 262

  Fly   788 -NSLSQIKPIIYSAEEFKINEIPK-----------------YTLHKLISAVPARE--KGTWSLSA 832
             :.||:..|     |..::..:||                 ..:|:......|..  ..|:.:|.
 Worm   263 YSDLSKELP-----EFVRLTHVPKSGGVEQRTGQIRSKMRGENVHRYFYGTRANNLYPFTFDVSF 322

  Fly   833 KDMRYSNLLARLSSCLTGNAKSLTD-CQPLGVSLES----LKILHPT----------SKNYSREE 882
            .|         ::.|..| |:.|.| |.|.|:.:|:    |.|:.|:          |::...:|
 Worm   323 DD---------VTLCKIG-AEQLPDSCLPFGMEVENHETKLVIMEPSADIKHHLFAFSRSTKADE 377

  Fly   883 LIRGMEANVVYLCHHGAGLPQCLGIGVVRAIDYERKEL-YLVPAMPLQKMSLV 934
            .:  :::.|...|             :|..:|.|::.: .|.|...:....||
 Worm   378 NV--LKSPVFGFC-------------LVTEVDLEKRTMSILCPQRTIPSKVLV 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8414NP_611084.2 MSCRAMM_ClfA <29..354 CDD:468110
HC2 30..>163 CDD:369339
P-loop containing Nucleoside Triphosphate Hydrolases 639..824 CDD:476819 52/214 (24%)
clpf-1NP_001040858.1 CLP1 6..423 CDD:227910 98/443 (22%)
CLP1_P 121..306 CDD:406878 51/208 (25%)
Blue background indicates that the domain is not in the aligned region.

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