DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dg and dgn-2

DIOPT Version :10

Sequence 1:NP_788363.1 Gene:Dg / 36773 FlyBaseID:FBgn0034072 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_508253.1 Gene:dgn-2 / 186365 WormBaseID:WBGene00018943 Length:399 Species:Caenorhabditis elegans


Alignment Length:390 Identity:77/390 - (19%)
Similarity:133/390 - (34%) Gaps:96/390 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 PKPNTVLNELELSTQLPIDDFEGTATATQPTGTATATAIASTAAAAAATAAAATATATTANASAT 570
            ||||.:|..:.||:                  ..||..|.|...|....|...:.|||       
 Worm     3 PKPNFLLLLVLLSS------------------VFTARVIVSRKQAIDWAAFGDSTTAT------- 42

  Fly   571 TAGESEFHIESTTHRTISSKEGGEPDAISSGNNSLANNELSTPATPTSSVATTTASTPESSSISS 635
                      |.|.||:..|.....|.:   ..|...||:......|.:......:..:...:..
 Worm    43 ----------SPTDRTVDWKSESLLDDL---EESRMKNEIGEQLPKTKNELEVVLNALDMEQLKG 94

  Fly   636 NFVSTDYMEPQPEENSPPIIKTRLQKLAVTSGKAFTFHVLPETF--YDAEDQ----GNLRLALTD 694
            :                   ||:|....|...|...|.....:.  .|..||    .|..:.:..
 Worm    95 S-------------------KTKLNDDNVAKQKHMIFKCKSGSICRMDVSDQLQISKNATVFIHS 140

  Fly   695 KDGHELKANSWLQFNADKRELYGLPLDDTVSRWQYRLSATDSGNASVTET-VEISVQQHRAVRTI 758
            .|..|:    |:. :...|:..|:|:.:  .::.| |.|....|..:.|. :||.|:.:.:.   
 Worm   141 LDDAEV----WMD-SQHGRDFIGVPISE--GKFHY-LIAFHEPNGRIHEVPIEIDVEDYPSP--- 194

  Fly   759 NHEISVFVRINEKPGHNI-----DWQLKLINAVARTLDDSTNSAVVVREIRQTPHDPHSATFV-Y 817
            ||   :|..:...|...|     .::...|..:|..| :|....:.:.||    ::....|.: :
 Worm   195 NH---LFKLVISDPAVEIFDNFPHYRTIFIETLAEAL-NSDMDLIALDEI----YEVRDYTIISF 251

  Fly   818 FNETLPTSECPEKELKDIIARL---DANRLSDLVQPQLG----IKSITGQLIGSCQKDLTQVKPT 875
            ||.:|.||.|..|.:..:..::   :..:.|.....::|    :|:.....||.|:...:..:||
 Worm   252 FNNSLSTSTCDSKAIIKVAEKMYYTNGRKPSARFLTKMGEDFVVKNAMFSAIGQCKGVFSSPRPT 316

  Fly   876  875
             Worm   317  316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DgNP_788363.1 alpha_DG_C 60..190 CDD:473046
Dystroglycan_repeat 654..758 CDD:206636 24/110 (22%)
Dystroglycan_repeat 885..986 CDD:206636
DAG1 989..1262 CDD:461655
dgn-2NP_508253.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.