DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8405 and AT1G60995

DIOPT Version :9

Sequence 1:NP_001286475.1 Gene:CG8405 / 36772 FlyBaseID:FBgn0034071 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_001077749.1 Gene:AT1G60995 / 5007825 AraportID:AT1G60995 Length:623 Species:Arabidopsis thaliana


Alignment Length:569 Identity:126/569 - (22%)
Similarity:220/569 - (38%) Gaps:129/569 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YFRAAATYAELVPRKVQLTIEFLLLAKALLFFFTLIYVHNSFIKNP-CTC-----------LQDV 110
            :.|....:::::..:::..:|:..|..|:..|..|:.:|.::::.| |:.           |..:
plant     7 FIRVQERFSQILTPRIRGFLEYTYLFVAITLFCILVVMHANYVQQPGCSSELTGVELAEAELMQI 71

  Fly   111 K-----NWPREGVIRVEIIPHLAEKRAIWQGIKRDQE---------------------------- 142
            |     .|.|........:|.:.......:..|.|||                            
plant    72 KITSAGLWSRNDESTAADVPRVVAATDSLEVSKTDQESSTSEENTDDTFVKIDKEEPRSSFSVSA 136

  Fly   143 -------IVRSLKDSYYYGIGPQTRQNHETLKRYESILGKLGLPVR---PTFAYSNESLYYYFDA 197
                   |:|.|| ..|..|....:.....|:....|...:|:|:.   |...:     ..|.|.
plant   137 KENVRAAILRFLK-KCYRRISFVLQHTARILRGVRKIWNIIGIPLNLDVPKLLH-----VLYMDK 195

  Fly   198 INILDTYDHPNAIQLKNEEDDEEQYIVEYSLEYGHLRLSSSTRKRLRIPVLTVQLDPNTDKCFGD 262
            :|..       |:|....:..|.:....|::|.|:..|....:.|..|....|.:... ..|||:
plant   196 VNYY-------AVQWLESKTQEFEPTYLYTMEKGYFLLPDEAKSRHNIRTANVSISAR-HPCFGN 252

  Fly   263 SLTRYLLKRLLGYDDLLMASVRTIAEQEENKGYLRNVITGEHYRF-----VSMWWAAWSSYPAAF 322
            ...:.|:.|::|||.::|.|::..|.|    |||.|..|.|.|..     :....|.:..|....
plant   253 RWQQLLINRVVGYDTIIMNSLQNSAGQ----GYLYNYQTREFYNLSYSQELPDGSAHFGDYLVTK 313

  Fly   323 C---VMLLFTF-----SVSMLLRYSHHQIFVFIVDLLQMLEYNVSARFPIAPLLTV--------I 371
            |   :|.||.|     |||..||.:..::..|.|    .|:::...|.|...|:.|        :
plant   314 CGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFTV----QLQHHAQHRLPTFQLIFVHVIESLVFV 374

  Fly   372 LALVGMEAIMSEFFNDTTTAFYIILIVWIADQYDAICCHTSITKRHWLRFFYLYHFAFYAYHYRF 436
            ..::|:...:.||::|...||.::::||:.:.:..|...|.|:.:.:.|||.||...|:.|.:.:
plant   375 PIMIGILFFLFEFYDDQLLAFMVLVLVWLCELFTLISVRTPISMKFFPRFFLLYFLVFHIYFFSY 439

  Fly   437 SGQYRTLALLSSYLFTQHSMVFFFHRYELPAI----------MAQHQVFII-------------- 477
            :..:..|||:::..|.||.:::|::|:|:||:          :.||..|.|              
plant   440 AYGFSYLALMTTAAFMQHLILYFWNRFEVPALQRFLQSRQSHLQQHPDFHITSSTILASTLHITR 504

  Fly   478 ----TRNQ---GAAAAAAAAAAGAGGAEAAGGGAGAGAAAGGQQGDGGA 519
                |||:   |................|.|||.|..|....||.:..|
plant   505 LNRTTRNRTPSGPNHTTPNQNTETRSFTADGGGVGNPAQYQEQQEENEA 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8405NP_001286475.1 Membralin 44..416 CDD:286789 91/433 (21%)
AT1G60995NP_001077749.1 Membralin 7..419 CDD:401625 91/433 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3415
eggNOG 1 0.900 - - E1_KOG2092
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006624
OrthoInspector 1 1.000 - - oto3358
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21650
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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