DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and lama4

DIOPT Version :9

Sequence 1:NP_001286474.1 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001034154.1 Gene:lama4 / 566796 ZFINID:ZDB-GENE-040724-213 Length:1871 Species:Danio rerio


Alignment Length:1409 Identity:254/1409 - (18%)
Similarity:446/1409 - (31%) Gaps:518/1409 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 EDSNSET-QEQKQKSLNLQQQQQQQQKVNS-----NDYYISAESINFNSESEGQEQQDV------ 213
            ||:..:. .:.|...|.||:::.|||::..     :...::|.::...:.....|.:||      
Zfish   553 EDALKQAINKYKSNQLKLQRREAQQQRLKDIQDGVDQTIVNAAAVLSEANHTVLEVEDVITNVRE 617

  Fly   214 --ADFKAASTMLPSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAPKQRVDVDYG-EGDGSDDYS 275
              |:...|..:|        .|.|.:.:.|.............:..:...:..:. :|..::.:.
Zfish   618 QHAEIDGARVLL--------ERRTEKISQSDRELVLRAEDHADQLQRHAEEPQHNLKGSDANGHV 674

  Fly   276 YSYKSDMSVY-------DDVN--------------------NNQLNLRRNSKSQT--------YQ 305
            ....:..:||       ||.|                    ::||||.|:..::.        :|
Zfish   675 QKALNAFNVYDNIVKSVDDANITSLTALNISSRTHGAVDKLSSQLNLMRSQSAKVLNEASSLHFQ 739

  Fly   306 QTSNTNTAKNRRKYPNVT-------SNKV--------QMHITRETNRLE-NISAAEPAVVGAAMT 354
            |..:.:...:.:||...|       |.|:        .:|..|...||: ....||..:..:|..
Zfish   740 QQDSESIVLDNKKYIEETNEMMDGSSKKIAKIITEINAIHTDRTPKRLQFTQEVAEGTLNRSAEV 804

  Fly   355 TDRSTPTCNLDCGSDGICALEATAASSRCLCPFGKT---GNGCQEDIRAHVPRFAKR-------- 408
            .::.||........||....||.:|::     |.:|   .....:|:.|.||....:        
Zfish   805 LEKVTPILKRVEQWDGNMKSEAYSAAA-----FDRTVLSAGEAVKDLSAIVPELLSKLRVVEEKK 864

  Fly   409 -------SWLAFPAL----HGAYKHVQLRIEFRPES---------FDGI---------ILLSGER 444
                   |.:....|    ....|.||:.::|..:|         .|.:         |.:..::
Zfish   865 PVNNVTTSIMKIRGLIAQARSVAKKVQVSMKFDGQSAVEVHPHTNLDELKTVTSISFYIRVDPDK 929

  Fly   445 DDLTGDFMALLLNKGFVEFWFDCGSGVGSVRSRETILLNEWNSVIIYR------------HRWDA 497
            |.:...|:..|            |...|. |....:.:...|.|.:|:            ....:
Zfish   930 DPIEDRFLLYL------------GDKQGK-RDYMGLAIKNDNLVYVYKLGEEEVEIPLSSKPVSS 981

  Fly   498 WLVLNHGTKVQ--GRSNGLFSRITFR------------EPV---------------FLGGIGNIT 533
            |..:.:..||:  ||...:|..:..:            |||               .:||:....
Zfish   982 WPPVFNFVKVERLGRHGKVFLTVPSQDTTAEQKFIQKGEPVGTDTLFDLDPKDMVFIVGGVPPGV 1046

  Fly   534 GLAKRLPLAEGFAGCIRRFVANEHDYKFTEHPLGDVINGFDIQDCSTDKCVRYPCQHGGKCLPSD 598
            .:...|.||. |.|||.....|           .|||:.::.:...                   
Zfish  1047 TVPPILSLAP-FVGCIELETLN-----------NDVISLYNFKQLH------------------- 1080

  Fly   599 QGAICLCPIGFVGDLCEIRMDLQVPAFNGSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSG 663
                              :||::..          ||.....|.:.:.:||              
Zfish  1081 ------------------KMDVKAS----------APCPRHKLAFSQSRVT-------------- 1103

  Fly   664 PEHRGDFIALYLNDGFVEFAFDLGSGPALVRSEHSLSLGQWHTIKISRTARLAVL-KVDKHQEVL 727
                             .:.|| |:|.|||.:             |.|..::.|: :.|  .||.
Zfish  1104 -----------------SYLFD-GTGYALVNN-------------IERRGKIGVVTRFD--IEVR 1135

  Fly   728 TISSNGFWHLSLDQ-NLFVGGVNHVDRLPLDLKYKPFFVGCIQRIDINGHSLGIVAEALGGSNIG 791
            |:::||...|.::: |.||          |:||              ||. |.::.: .|.:|  
Zfish  1136 TVANNGILFLMVNETNFFV----------LELK--------------NGF-LRLMYD-FGFAN-- 1172

  Fly   792 NCPHACVARPCGPLAECVPQMESYECRCSIHNERCNKAAEVPPEQLPELALHKSKVLETKDNGEA 856
                       ||:.     :|:...:..|::.|.::.:.:         .|.|           
Zfish  1173 -----------GPVI-----IETNLAKLQINDARYHEVSVI---------YHHS----------- 1201

  Fly   857 AKKVSGLAHKKHSKKHRNLHKPTPATSTTTSTTSTTTTTTEAPSERTEEATAGALSNEEIEDDII 921
             ||:..|..:.|.|...:..||.|.:.....         .|||...:       |..|:...|.
Zfish  1202 -KKIILLVDRSHVKSFESEKKPLPFSDIYIG---------GAPSRILQ-------SRPELTSLIG 1249

  Fly   922 FR-LVQQQQQQKE----LKKQHQQTTTTAPATSTTSSG-PSKA----KPRLSGKHHASKHEHHLK 976
            .: .|:..|.|||    |::|         .|...||| |.::    |...:|..:.|..: .:.
Zfish  1250 LKGCVKGFQFQKEDFNLLEEQ---------GTIGISSGCPEESFMSHKAYFTGNGYLSSSD-KIS 1304

  Fly   977 PNAAFTRKLSRLPTHYESFQTNPDSDILTF--EDNNDWVTSL----------------QQQEYGD 1023
            |..:|...|        ||:|...|.:|.:  :.::::..||                |::.|.|
Zfish  1305 PFQSFEGGL--------SFKTLQPSGLLFYHRDGSDEFSLSLENGAVVLQAKGTRVKSQKKHYSD 1361

  Fly  1024 A----MAASQVPLAFE-------DASPGTPRSSDNNEDDENAFVFDESLF--------------- 1062
            .    :.||.....:|       ......|.|:..:::...||.:..|..               
Zfish  1362 GRSHFLVASVTNQKYEIVIDDKDKQDKKKPSSTSQSDNTPKAFYYGGSTSSSILNLTGCISYAYI 1426

  Fly  1063 ---DASDGTEEYQRKQLAQDMKRIMSNSNAHSSHKKAEVQFPPQG---------------SQEVG 1109
               |.....|::||           .:.|..:|.:...::.||..               |::||
Zfish  1427 SRQDRDIEPEDFQR-----------YSENVQASLQDCPIERPPSALLKDSRDSSRRSAGHSRKVG 1480

  Fly  1110 TANEDTSQYSDDYNDDELLTPVMQGGEEVKLEQHTSSTPQT--HTDWSLLKKFDLSAEHQSQVQG 1172
               .|.|........:.|..|     |:.:...:.||.|:.  |.:     .:..||..:.:..|
Zfish  1481 ---RDESGLPHGLKSNPLNIP-----EKEEASCYLSSRPRATPHAN-----HYGGSAHSRHEYTG 1532

  Fly  1173 VRKNFGACFAGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHDDYLSL 1237
            :                       :..|.:....:|.:||.|..|:|.:.    .....::.::|
Zfish  1533 I-----------------------ASAIKHESHFSLSLKTRSAFGLIFYL----ADASGENSMAL 1570

  Fly  1238 GIEQGYLHFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRNSQEGYLEVDGRKTVTLRAPGKLRQL 1302
            .:....|.|.:..|..:|.|| :..|.:||.||.:..||....|.:.:||...:..||||:...|
Zfish  1571 FLTHARLVFTFSSGQSQVRIR-SKEKYNDGQWHDIIFIRAGNMGRMLIDGLTVLEDRAPGRNTSL 1634

  Fly  1303 NTDTGLYVGGMPDVGYFTHQRY-------FSGIVGCISEIVLAG 1339
            .....|||||:|     .||..       .|...||:..:.|.|
Zfish  1635 LVQDPLYVGGVP-----PHQAMKNIQRTSVSSFTGCVRSLQLNG 1673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_001286474.1 FXa_inhibition 53..82 CDD:291342
LamG 404..555 CDD:238058 36/228 (16%)
EGF 583..612 CDD:278437 0/28 (0%)
LamG 625..774 CDD:238058 28/150 (19%)
LamG 1205..1340 CDD:214598 41/142 (29%)
lama4NP_001034154.1 EGF_Lam 48..>84 CDD:238012
Laminin_EGF 99..152 CDD:278482
EGF_Lam 155..207 CDD:238012
EGF_Lam 209..247 CDD:214543
EGF_Lam 256..300 CDD:214543
Laminin_I 351..611 CDD:283627 11/57 (19%)
SPEC 474..665 CDD:295325 19/119 (16%)
Laminin_II 790..919 CDD:283628 24/133 (18%)
LamG 893..1067 CDD:238058 31/187 (17%)
LamG 1104..1259 CDD:238058 50/251 (20%)
LamG 1289..1422 CDD:238058 23/141 (16%)
LamG 1535..1672 CDD:238058 40/146 (27%)
LamG 1696..1847 CDD:238058
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3509
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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