DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and lama4

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001034154.1 Gene:lama4 / 566796 ZFINID:ZDB-GENE-040724-213 Length:1871 Species:Danio rerio


Alignment Length:1409 Identity:254/1409 - (18%)
Similarity:446/1409 - (31%) Gaps:518/1409 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 EDSNSET-QEQKQKSLNLQQQQQQQQKVNS-----NDYYISAESINFNSESEGQEQQDV------ 213
            ||:..:. .:.|...|.||:::.|||::..     :...::|.::...:.....|.:||      
Zfish   553 EDALKQAINKYKSNQLKLQRREAQQQRLKDIQDGVDQTIVNAAAVLSEANHTVLEVEDVITNVRE 617

  Fly   214 --ADFKAASTMLPSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAPKQRVDVDYG-EGDGSDDYS 275
              |:...|..:|        .|.|.:.:.|.............:..:...:..:. :|..::.:.
Zfish   618 QHAEIDGARVLL--------ERRTEKISQSDRELVLRAEDHADQLQRHAEEPQHNLKGSDANGHV 674

  Fly   276 YSYKSDMSVY-------DDVN--------------------NNQLNLRRNSKSQT--------YQ 305
            ....:..:||       ||.|                    ::||||.|:..::.        :|
Zfish   675 QKALNAFNVYDNIVKSVDDANITSLTALNISSRTHGAVDKLSSQLNLMRSQSAKVLNEASSLHFQ 739

  Fly   306 QTSNTNTAKNRRKYPNVT-------SNKV--------QMHITRETNRLE-NISAAEPAVVGAAMT 354
            |..:.:...:.:||...|       |.|:        .:|..|...||: ....||..:..:|..
Zfish   740 QQDSESIVLDNKKYIEETNEMMDGSSKKIAKIITEINAIHTDRTPKRLQFTQEVAEGTLNRSAEV 804

  Fly   355 TDRSTPTCNLDCGSDGICALEATAASSRCLCPFGKT---GNGCQEDIRAHVPRFAKR-------- 408
            .::.||........||....||.:|::     |.:|   .....:|:.|.||....:        
Zfish   805 LEKVTPILKRVEQWDGNMKSEAYSAAA-----FDRTVLSAGEAVKDLSAIVPELLSKLRVVEEKK 864

  Fly   409 -------SWLAFPAL----HGAYKHVQLRIEFRPES---------FDGI---------ILLSGER 444
                   |.:....|    ....|.||:.::|..:|         .|.:         |.:..::
Zfish   865 PVNNVTTSIMKIRGLIAQARSVAKKVQVSMKFDGQSAVEVHPHTNLDELKTVTSISFYIRVDPDK 929

  Fly   445 DDLTGDFMALLLNKGFVEFWFDCGSGVGSVRSRETILLNEWNSVIIYR------------HRWDA 497
            |.:...|:..|            |...|. |....:.:...|.|.:|:            ....:
Zfish   930 DPIEDRFLLYL------------GDKQGK-RDYMGLAIKNDNLVYVYKLGEEEVEIPLSSKPVSS 981

  Fly   498 WLVLNHGTKVQ--GRSNGLFSRITFR------------EPV---------------FLGGIGNIT 533
            |..:.:..||:  ||...:|..:..:            |||               .:||:....
Zfish   982 WPPVFNFVKVERLGRHGKVFLTVPSQDTTAEQKFIQKGEPVGTDTLFDLDPKDMVFIVGGVPPGV 1046

  Fly   534 GLAKRLPLAEGFAGCIRRFVANEHDYKFTEHPLGDVINGFDIQDCSTDKCVRYPCQHGGKCLPSD 598
            .:...|.||. |.|||.....|           .|||:.::.:...                   
Zfish  1047 TVPPILSLAP-FVGCIELETLN-----------NDVISLYNFKQLH------------------- 1080

  Fly   599 QGAICLCPIGFVGDLCEIRMDLQVPAFNGSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSG 663
                              :||::..          ||.....|.:.:.:||              
Zfish  1081 ------------------KMDVKAS----------APCPRHKLAFSQSRVT-------------- 1103

  Fly   664 PEHRGDFIALYLNDGFVEFAFDLGSGPALVRSEHSLSLGQWHTIKISRTARLAVL-KVDKHQEVL 727
                             .:.|| |:|.|||.:             |.|..::.|: :.|  .||.
Zfish  1104 -----------------SYLFD-GTGYALVNN-------------IERRGKIGVVTRFD--IEVR 1135

  Fly   728 TISSNGFWHLSLDQ-NLFVGGVNHVDRLPLDLKYKPFFVGCIQRIDINGHSLGIVAEALGGSNIG 791
            |:::||...|.::: |.||          |:||              ||. |.::.: .|.:|  
Zfish  1136 TVANNGILFLMVNETNFFV----------LELK--------------NGF-LRLMYD-FGFAN-- 1172

  Fly   792 NCPHACVARPCGPLAECVPQMESYECRCSIHNERCNKAAEVPPEQLPELALHKSKVLETKDNGEA 856
                       ||:.     :|:...:..|::.|.::.:.:         .|.|           
Zfish  1173 -----------GPVI-----IETNLAKLQINDARYHEVSVI---------YHHS----------- 1201

  Fly   857 AKKVSGLAHKKHSKKHRNLHKPTPATSTTTSTTSTTTTTTEAPSERTEEATAGALSNEEIEDDII 921
             ||:..|..:.|.|...:..||.|.:.....         .|||...:       |..|:...|.
Zfish  1202 -KKIILLVDRSHVKSFESEKKPLPFSDIYIG---------GAPSRILQ-------SRPELTSLIG 1249

  Fly   922 FR-LVQQQQQQKE----LKKQHQQTTTTAPATSTTSSG-PSKA----KPRLSGKHHASKHEHHLK 976
            .: .|:..|.|||    |::|         .|...||| |.::    |...:|..:.|..: .:.
Zfish  1250 LKGCVKGFQFQKEDFNLLEEQ---------GTIGISSGCPEESFMSHKAYFTGNGYLSSSD-KIS 1304

  Fly   977 PNAAFTRKLSRLPTHYESFQTNPDSDILTF--EDNNDWVTSL----------------QQQEYGD 1023
            |..:|...|        ||:|...|.:|.:  :.::::..||                |::.|.|
Zfish  1305 PFQSFEGGL--------SFKTLQPSGLLFYHRDGSDEFSLSLENGAVVLQAKGTRVKSQKKHYSD 1361

  Fly  1024 A----MAASQVPLAFE-------DASPGTPRSSDNNEDDENAFVFDESLF--------------- 1062
            .    :.||.....:|       ......|.|:..:::...||.:..|..               
Zfish  1362 GRSHFLVASVTNQKYEIVIDDKDKQDKKKPSSTSQSDNTPKAFYYGGSTSSSILNLTGCISYAYI 1426

  Fly  1063 ---DASDGTEEYQRKQLAQDMKRIMSNSNAHSSHKKAEVQFPPQG---------------SQEVG 1109
               |.....|::||           .:.|..:|.:...::.||..               |::||
Zfish  1427 SRQDRDIEPEDFQR-----------YSENVQASLQDCPIERPPSALLKDSRDSSRRSAGHSRKVG 1480

  Fly  1110 TANEDTSQYSDDYNDDELLTPVMQGGEEVKLEQHTSSTPQT--HTDWSLLKKFDLSAEHQSQVQG 1172
               .|.|........:.|..|     |:.:...:.||.|:.  |.:     .:..||..:.:..|
Zfish  1481 ---RDESGLPHGLKSNPLNIP-----EKEEASCYLSSRPRATPHAN-----HYGGSAHSRHEYTG 1532

  Fly  1173 VRKNFGACFAGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHDDYLSL 1237
            :                       :..|.:....:|.:||.|..|:|.:.    .....::.::|
Zfish  1533 I-----------------------ASAIKHESHFSLSLKTRSAFGLIFYL----ADASGENSMAL 1570

  Fly  1238 GIEQGYLHFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRNSQEGYLEVDGRKTVTLRAPGKLRQL 1302
            .:....|.|.:..|..:|.|| :..|.:||.||.:..||....|.:.:||...:..||||:...|
Zfish  1571 FLTHARLVFTFSSGQSQVRIR-SKEKYNDGQWHDIIFIRAGNMGRMLIDGLTVLEDRAPGRNTSL 1634

  Fly  1303 NTDTGLYVGGMPDVGYFTHQRY-------FSGIVGCISEIVLAG 1339
            .....|||||:|     .||..       .|...||:..:.|.|
Zfish  1635 LVQDPLYVGGVP-----PHQAMKNIQRTSVSSFTGCVRSLQLNG 1673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251
LamG 404..555 CDD:238058 36/228 (16%)
EGF 583..612 CDD:394967 0/28 (0%)
LamG 625..774 CDD:238058 28/150 (19%)
LamG 1205..1340 CDD:214598 41/142 (29%)
lama4NP_001034154.1 Laminin_EGF 99..152 CDD:395007
EGF_Lam 155..207 CDD:238012
EGF_Lam 209..247 CDD:214543
EGF_Lam 256..300 CDD:214543
Laminin_I 356..611 CDD:310534 11/57 (19%)
Cast <490..817 CDD:431111 46/271 (17%)
Laminin_II 790..919 CDD:368703 24/133 (18%)
LamG 893..1067 CDD:238058 31/187 (17%)
LamG 1104..1259 CDD:238058 50/251 (20%)
LamG 1289..1422 CDD:238058 23/141 (16%)
LamG 1535..1672 CDD:238058 40/146 (27%)
LamG 1696..1847 CDD:238058
Blue background indicates that the domain is not in the aligned region.

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