DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and lamb2l

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:XP_692838.6 Gene:lamb2l / 553337 ZFINID:ZDB-GENE-030131-4205 Length:1836 Species:Danio rerio


Alignment Length:734 Identity:134/734 - (18%)
Similarity:237/734 - (32%) Gaps:210/734 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   564 HPLGDVINGFDIQDC--STDKCVRYPCQHGGKCLPSDQGAICLCPIGFVGD-------------- 612
            ||||.     :...|  :|..||   |:.|......|:     |..||.|:              
Zfish  1178 HPLGS-----ETSQCDRTTGACV---CKDGASGQRCDE-----CARGFTGNFPKCVPCHPCFQLW 1229

  Fly   613 ---LCEIRMDL--------------QVPAFNGSSFLRYAPLGDSALIWLELKVTLKPEQADGLIL 660
               :|::|.||              :||.           :.|..::.||.|:.    ||..|:.
Zfish  1230 DDVVCQVRRDLTHFRDIIAMILEKGEVPG-----------VSDKRILELEKKLA----QAQELVR 1279

  Fly   661 YSGPEHRGDFIALYLNDGFVEFAFDLGSGPALVR-----SEHSLSLGQ---------------WH 705
            ....|...:.|:..::|...|.|...|....::|     ::|:..|.|               .|
Zfish  1280 DGDREGTFNLISQTVDDLRAEIALTDGRLMGVIRDLNVTTDHNNDLKQNLTALEKELKDLNNTLH 1344

  Fly   706 TIKISRTARLAVLKVDKHQEVLTISSNGFWHLSLDQ----NLFVGGV-----------NHVDRLP 755
            .::......|.....::...||.     ::..||:.    |..|.|.           |..:.|.
Zfish  1345 QLRRELENYLTAGLAEQFANVLK-----YYQRSLNSEQRCNASVYGPQSPVEQSQDTRNRTEALL 1404

  Fly   756 LDLKYKPFFVGCIQRIDINGHSLG---------------IVAEALGGSNIGNCPHACVARPCGPL 805
            .|.|     ...::....|..||.               :..:..||...||...:|...|||. 
Zfish  1405 KDKK-----DSLLRTATANNKSLSELEGKAHEINRKVHHLSNKVCGGHANGNVNGSCEESPCGG- 1463

  Fly   806 AEC-----VPQMESYECRCSI--------HNERCNKAAEVPPEQLPELALH-----------KSK 846
            |.|     |.:.....|..::        :.:..:|......|:|..:|..           |::
Zfish  1464 AGCRGSDGVLKCGGRGCNGTVGASVKALDNADEVHKNLTAVSEELQTMAKKLRDIATLTQTVKTQ 1528

  Fly   847 VLETKDNGEAAKKV---SGLAHKKHSKKHRNLHKPTPATSTTTSTTSTTTTTTEAPSERTEEATA 908
            ..||.|..:..|.:   |....|...:|.::......|...:....:........|..||     
Zfish  1529 AKETLDKAQNKKDMFEKSNKMLKNFIQKIKDFLNEEGADPESIEKVAQQVLAISLPVNRT----- 1588

  Fly   909 GALSN--EEIEDDI--------IFRLVQQQ-QQQKELKKQHQQTTTTAPATSTTSSGPSKAKPRL 962
             .:.|  |:|:|.|        :|....:| .:..:|.|:.|...|.|..   .|...:|.|..|
Zfish  1589 -VIVNLVEQIKDSIVNLTNVEGVFNHTSEQLAKVNDLLKKAQDAKTQADG---VSDNINKTKEAL 1649

  Fly   963 SGKHHASKHEHHLKPNAAFTRKLSRLPTHYESFQTNPDSDILTFEDNNDWVTSLQQQEYGDAMAA 1027
            ....:|.|     |.....:..|..| .:.::.....|..:|..::|                 .
Zfish  1650 ETSQNAIK-----KAEEEMSTALKNL-KNIQNITAMVDDKLLNLDNN-----------------L 1691

  Fly  1028 SQVPLAFEDASPGTPRSSDNNEDDENAFVFDESLFDASDGTEEYQRKQLAQDMKRIMSNSNAHSS 1092
            :.|.:...:.|.|....  .|:.::|..:..|:...:.:.|.|      |:.::..:  :||.:.
Zfish  1692 TDVMMRLVNLSNGVDLL--KNKTEQNREMAKEAKAQSDNATRE------AEGLQEEL--TNAETL 1746

  Fly  1093 HKKAEVQFPPQGSQEVGTANEDTSQYSDDYNDDELLTPVMQGGEEV-KLEQHTSSTPQTHTDWSL 1156
            :|:.:.:....|....|..|:...:...:..|  ||.....|.|.: |||:..:...|     .:
Zfish  1747 YKQLKEKVDSAGGTGEGNVNQKAIEMKKEAED--LLKKATMGMETLKKLERKFNKNEQ-----KM 1804

  Fly  1157 LKKFDLSAEHQSQVQGVRK 1175
            .::.|...:.:..|.|:|:
Zfish  1805 QQQRDELTDLEKNVTGIRE 1823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251
LamG 404..555 CDD:238058
EGF 583..612 CDD:394967 8/28 (29%)
LamG 625..774 CDD:238058 30/183 (16%)
LamG 1205..1340 CDD:214598
lamb2lXP_692838.6 Laminin_N 32..266 CDD:459653
EGF_Lam 267..320 CDD:238012
EGF_Lam 332..384 CDD:238012
Laminin_EGF 395..452 CDD:395007
EGF_Lam 454..505 CDD:238012
EGF_Lam 506..>545 CDD:238012
EGF_Lam 816..861 CDD:214543
Laminin_EGF 864..912 CDD:395007
EGF_Lam 910..954 CDD:238012
Laminin_EGF 960..1016 CDD:395007
Laminin_EGF 1019..1063 CDD:395007
Laminin_EGF <1089..1129 CDD:395007
EGF_Lam 1126..1168 CDD:238012
Laminin_EGF 1175..1215 CDD:395007 14/49 (29%)
COG4372 1245..>1436 CDD:443500 35/215 (16%)
Mplasa_alph_rch 1492..>1818 CDD:275316 65/374 (17%)
cc_LAMB_C 1766..1835 CDD:411969 14/65 (22%)
Blue background indicates that the domain is not in the aligned region.

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