DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SP2353 and trol

DIOPT Version :9

Sequence 1:NP_001286474.1 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001027038.3 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4479 Species:Drosophila melanogaster


Alignment Length:1331 Identity:265/1331 - (19%)
Similarity:411/1331 - (30%) Gaps:515/1331 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 DSYDYGELED------SNSETQEQKQKSLNLQQQQ--------------QQQQKVNSNDYYISAE 197
            |:.::....|      :|:.|..|.....||:.:.              ||..:|:.:...:.|.
  Fly  3486 DNVEFNWFRDDRRPLPNNARTDSQILVLTNLRPEDAGRYICNSYDVDRGQQLPEVSIDLQVLRAP 3550

  Fly   198 SINFNSESEGQEQQD----VADFKAASTMLPSS---VPP-TPSR------------STTRATAST 242
            ...:|....|...:|    |....||:|..|:|   :|| .|::            |..||..||
  Fly  3551 QYPYNRFKGGVSLKDTPCMVLYICAAATPPPNSPIYLPPQLPAKSRDYSLKLDDQSSNLRAGEST 3615

  Fly   243 ---------TTTTTTTRRSP-------TRAPKQRVDV------DYG------EGDGSDDYSYSY- 278
                     |.|.....||.       .|....|:.:      |.|      :.|..|.|:.|| 
  Fly  3616 DVECYSSDDTYTDVVWERSDGAPLSNNVRQVGNRLVISNVSPSDAGNYVCKCKTDEGDLYTTSYK 3680

  Fly   279 ----------KSDMSVYDDVNNNQLNLRRNSKSQTYQQTSNTNTAKNRRKYPNVTSNKVQMHITR 333
                      ||...||..|.       .|:..|.....|...|.:..|:|..:.:.:..|:   
  Fly  3681 LEVEDQPHELKSSKIVYAKVG-------ANADLQCGADESRQPTYRWSRQYGQLQAGRSLMN--- 3735

  Fly   334 ETNRLENISAAEPAVVGAAMTTDRSTPTCNLDCGSDGICALEATAASSRCLCPFGKTGNGCQEDI 398
            |...|:::.|           .|..|..|.... :||     .||.....|...|.         
  Fly  3736 EKLSLDSVQA-----------NDAGTYICTAQY-ADG-----ETADFPNILVVTGA--------- 3774

  Fly   399 RAHVPRFAK--RSWLAFPALHGAYKHVQLRIEFRPESFDGIILLSGERDDLTGDFMALLLNKGFV 461
               :|:|.:  ||:::||.|..:.......:.||||:.||::|.:|:... :||::||.|...:.
  Fly  3775 ---IPQFRQEPRSYMSFPTLPNSSFKFNFELTFRPENGDGLLLFNGQTRG-SGDYIALSLKDRYA 3835

  Fly   462 EFWFDCGSGVGSVRSRETILLNEWNSVIIYRHRWDAWLVLNHGTKVQGRSNGLFSRITFREPVFL 526
            ||.||.|.....||:.|.:.||||::|.:.|.:.|.::.::....|...:.....::...|.:::
  Fly  3836 EFRFDFGGKPMLVRAEEPLALNEWHTVRVSRFKRDGYIQVDEQHPVAFPTLQQIPQLDLIEDLYI 3900

  Fly   527 GGIGNITGL-AKRLPLAEGFAGCIRRF--------VANEHDYKFTEHPLGDVINGFDIQDCSTDK 582
            ||:.|...| |..:....||.|||.|.        :..|..||          .|  |.||.  .
  Fly  3901 GGVPNWELLPADAVSQQVGFVGCISRLTLQGRTVELIREAKYK----------EG--ITDCR--P 3951

  Fly   583 CVRYPCQHGGKCLPS---------------------------------------DQGAICLCPIG 608
            |.:.|||:.|.||.|                                       :....||||:.
  Fly  3952 CAQGPCQNKGVCLESQTEQAYTCICQPGWTGRDCAIEGTQCTPGVCGAGRCENTENDMECLCPLN 4016

  Fly   609 FVGDLCEIRMDLQVPA--FNGSSFLRYAPLGDSALIWLELKVTLKPEQ-ADGLILYSGPE--HRG 668
            ..||.|:....|...:  |.|:||..|   |...:..:.:.::::|.. .|.:|||:...  ..|
  Fly  4017 RSGDRCQYNEILNEHSLNFKGNSFAAY---GTPKVTKVNITLSVRPASLEDSVILYTAESTLPSG 4078

  Fly   669 DFIALYLNDGFVEFAFDLGS--GPALVRSEHSLSLGQWHTIKISRTARLAVLKVDKHQEVLTISS 731
            |::||.|..|..|...:..:  .|.:|||...|.|.:|..|:|.|.....:|:|....|....:.
  Fly  4079 DYLALVLRGGHAELLINTAARLDPVVVRSAEPLPLNRWTRIEIRRRLGEGILRVGDGPERKAKAP 4143

  Fly   732 NGFWHLSLDQNLFVGGVNH----VDRLPLDLKYKPFFVGCIQRIDINGHSLGIVAEALGGSNIGN 792
            .....|||..:|:|||.:.    |:|   |:.....|.|||.|:......:.::|:....:||.:
  Fly  4144 GSDRILSLKTHLYVGGYDRSTVKVNR---DVNITKGFDGCISRLYNFQKPVNLLADIKDAANIQS 4205

  Fly   793 CPHACVARPCGPLAECVPQMESYECRCSIHNERCNKAAEVPPEQLPELALHKSKVLETKDNGEAA 857
            |.                     |......:|..:....|||                       
  Fly  4206 CG---------------------ETNMIGGDEDSDNEPPVPP----------------------- 4226

  Fly   858 KKVSGLAHKKHSKKHRNLHKPTPATSTTTSTTSTTTTTTEAPSERTEEATAGALSNEEIEDDIIF 922
                                |||                                      |:  
  Fly  4227 --------------------PTP--------------------------------------DV-- 4231

  Fly   923 RLVQQQQQQKELKKQHQQTTTTAPATSTTSSGPSKAKPRLSGKHHASKHEHHLKPNAAFTRKLSR 987
                                                            ||:.|:|.         
  Fly  4232 ------------------------------------------------HENELQPY--------- 4239

  Fly   988 LPTHYESFQTNPDSDILTFEDNNDWVTSLQQQEYGDAMAASQVPLAFEDASPGTPRSSDNNEDDE 1052
                                                |||               |.:||..|:. 
  Fly  4240 ------------------------------------AMA---------------PCASDPCENG- 4252

  Fly  1053 NAFVFDESLFDASDGTEEYQRKQLAQDMKRIMSNSNAHSSHKKAEVQFPPQGSQEVGTANEDTSQ 1117
                                                                    |:.:|.   
  Fly  4253 --------------------------------------------------------GSCSEQ--- 4258

  Fly  1118 YSDDYNDDELLTPVMQGGEEVKLEQHTSSTPQTHTDWSLLKKFDLSAEH-QSQVQGVRKNFGACF 1181
                              |:|.:    .|.|           |..|.:| |..:|   ..|.|.|
  Fly  4259 ------------------EDVAV----CSCP-----------FGFSGKHCQEHLQ---LGFNASF 4287

  Fly  1182 AGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEH--DDYLSLGIEQGYL 1244
            .| |.|...|.:.....:......:.:...|:..||::.|.| |...||:  .|:::..:..||:
  Fly  4288 RG-DGYVELNRSHFQPALEQSYTSMGIVFTTNKPNGLLFWWG-QEAGEEYTGQDFIAAAVVDGYV 4350

  Fly  1245 HFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRNSQEGYLEVDGRKTVTLRAPGKLRQLNTDTGLY 1309
            .:...|...|..||.:..:|.:|..|.|.|.|:.....||||.........|...:.:.....::
  Fly  4351 EYSMRLDGEEAVIRNSDIRVDNGERHIVIAKRDENTAILEVDRMLHSGETRPTSKKSMKLPGNVF 4415

  Fly  1310 VGGMPDVGYFTHQRYFSGIVGCISEIVLAGE 1340
            |||.||:..||..||...:.|||  :|:.||
  Fly  4416 VGGAPDLEVFTGFRYKHNLNGCI--VVVEGE 4444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_001286474.1 FXa_inhibition 53..82 CDD:291342
LamG 404..555 CDD:238058 47/161 (29%)
EGF 583..612 CDD:278437 12/67 (18%)
LamG 625..774 CDD:238058 46/157 (29%)
LamG 1205..1340 CDD:214598 39/136 (29%)
trolNP_001027038.3 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060
LDLa 704..739 CDD:238060
LDLa 813..847 CDD:238060
LDLa 852..887 CDD:238060
LDLa 902..936 CDD:238060
LDLa 956..990 CDD:238060
LDLa 997..1030 CDD:238060
LDLa 1033..1067 CDD:238060
LDLa 1072..1105 CDD:238060
LDLa 1133..1165 CDD:238060
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060
IG 1344..1421 CDD:214652
Ig 1344..1405 CDD:299845
LDLa 1439..1473 CDD:238060
LDLa 1479..1513 CDD:238060
LDLa 1522..1556 CDD:238060
IG_like 1566..1649 CDD:214653
Ig_Perlecan_D2_like 1574..1649 CDD:143220
Laminin_B 1748..1864 CDD:278481
EGF_Lam 1935..1989 CDD:238012
Laminin_B 2113..2238 CDD:278481
EGF_Lam <2250..2276 CDD:238012
EGF_Lam 2284..2333 CDD:238012
Laminin_EGF <2369..2399 CDD:278482
Laminin_B 2465..2587 CDD:278481
I-set 2686..2772 CDD:254352
Ig_2 2689..2771 CDD:290606
Ig 2779..2865 CDD:299845
IG_like 2798..2864 CDD:214653
Ig 2882..2965 CDD:299845
IG_like 2882..2950 CDD:214653
Ig 2977..3061 CDD:299845
IG_like 2984..3058 CDD:214653
IG_like 3074..3152 CDD:214653
Ig 3086..3153 CDD:299845
I-set 3155..3243 CDD:254352
IGc2 3171..3233 CDD:197706
IG 3371..3447 CDD:214652
IGc2 3377..3437 CDD:197706
Ig 3456..3534 CDD:299845 7/47 (15%)
IG 3465..>3526 CDD:214652 7/39 (18%)
Ig 3603..3665 CDD:299845 13/61 (21%)
IG 3610..3683 CDD:214652 17/72 (24%)
IG 3696..3762 CDD:214652 18/92 (20%)
Ig 3704..3771 CDD:299845 17/86 (20%)
LamG 3784..3929 CDD:238058 45/145 (31%)
EGF 3952..3984 CDD:278437 8/31 (26%)
LamG 4032..4185 CDD:238058 46/158 (29%)
Laminin_G_2 4315..4444 CDD:280389 39/131 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D17288at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10574
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.