DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and LanB2

DIOPT Version :9

Sequence 1:NP_001286474.1 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001287009.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster


Alignment Length:1582 Identity:265/1582 - (16%)
Similarity:431/1582 - (27%) Gaps:642/1582 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GHCGHTSPCEQLCYEIHDGMYECD-CIEGYELNKNGY----SCQVINATSNSLDGRGKSD----- 99
            ||.||...|.    |..||. .|: |.|.:.:..:||    :|..:.:.|...:..||..     
  Fly   379 GHGGHCLDCR----ENRDGP-NCERCKENFYMRDDGYCVNCACDPVGSRSLQCNSHGKCQCKPGV 438

  Fly   100 --------EDVLYQKGASFSAKLANDDGGKSMAKSTFALSAAQSASPAGNENG-----EDESGSE 151
                    ::..||.|.....:...|.||           :.|:......|.|     |:..|  
  Fly   439 TGDKCDRCDNNYYQFGPHGCQQCGCDSGG-----------SHQNTPACDTETGICFCKENVEG-- 490

  Fly   152 GDSYDYGELEDSNSETQEQKQKSLNLQQQQQ-----------QQQKVNSNDYYISAESINFNSES 205
                         ....|.|....||.:..:           ..:.:.:..|.|.:.:.|||...
  Fly   491 -------------RRCNECKPGFFNLDKNNRFGCTPCFCYGHTSECMTAPGYSIVSVTSNFNKFK 542

  Fly   206 EGQEQQDVADFKAASTMLPSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAPKQRVDVDYGEGDG 270
            |                              |.||:...             ::.||:.|.:   
  Fly   543 E------------------------------RWTAADLN-------------QREVDIKYNQ--- 561

  Fly   271 SDDYSYSY----KSDMSVYDDVNNNQLNLRRNS-------KSQTYQQTSNTNT-------AKNRR 317
               ||.|.    :.:..||....:..|..:|.|       |.|...|.:||..       |.:|.
  Fly   562 ---YSRSIGTTAQGNEHVYFQAPDRFLGDQRASYNRDLKFKLQLVGQVANTGVSDVILEGAGSRI 623

  Fly   318 KYP-----------NVTSNKVQMHITRE------------TNRLENISA----AEPAVVGAAMTT 355
            ..|           .|.....::|...:            .:.|.|::|    |..:|.|.|:..
  Fly   624 SLPIFAQGNGIPDQGVKEYTFRLHEHHDYQWQPSQSARGFLSILSNLTAIKIRATYSVQGEAILD 688

  Fly   356 DRSTPTCNLDCGSDGICALEATAASSRCLCPFGKTGNGCQEDIRAHVPRFAKRSWLAFPALHGAY 420
            |....|.:..........:|      :|.||.|..|..|:                   :....|
  Fly   689 DVELQTAHRGAAGHPATWIE------QCTCPEGYLGQFCE-------------------SCAPGY 728

  Fly   421 KHVQLRIEFRPESFDGIILLSGERDDLTGDFMALLLNKGFVEFWFDCGSGVGSVRSRETILLNEW 485
            :|...|                     .|.||..:.        .|| .|...:...||      
  Fly   729 RHSPAR---------------------GGPFMPCIP--------CDC-HGHADICDSET------ 757

  Fly   486 NSVIIYRHRWDAWLVLNHGTKVQGRSNGLFSRITFREPVFLGGIGNITGLAKRLPLAEGFAGCIR 550
             ...|.:|.       .||......:.|.:...       |||..|                   
  Fly   758 -GRCICQHN-------THGDNCDQCAKGFYGNA-------LGGTPN------------------- 788

  Fly   551 RFVANEHDYKFTEHPLGDVINGFDIQDCSTDKCVRYPCQHGGKCLP-SDQGAICL-CPIGFVGDL 613
                                           .|.|.||.:.|.||. ::...||. ||.|:.|..
  Fly   789 -------------------------------DCKRCPCPNDGACLQINEDTVICTECPKGYFGSR 822

  Fly   614 CEIRMDLQVPAFNGSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSGPEHRGDFIALYLNDG 678
            ||...|         .|     .||...:..|:: |.|....:|.:   .|...|:         
  Fly   823 CEQCSD---------GF-----FGDPTGLLGEVQ-TCKSCDCNGNV---DPNAVGN--------- 860

  Fly   679 FVEFAFDLGSGPAL-----VRSEH-----SLSLGQWHTIKISRTARLAVLKVDKHQEVLTI---- 729
                 .:..:|..|     ...||     |...|....:...|..|.:..:....|:..:|    
  Fly   861 -----CNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCD 920

  Fly   730 ----------------------------SSNGFWHLSLDQNLFVGGVNHV-DRLPLDLKYKPFFV 765
                                        |.||..:...|.   ||..|.. ||.......:|..:
  Fly   921 QVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDP---VGSYNSTCDRYSGQCHCRPGVM 982

  Fly   766 GCIQRID-INGHSLGIVAEALGGSNIGNCPHACVARPCGPLAEC---------VPQMESYECRCS 820
            |  ||.| ...:..|..:|.              .:||    ||         ..|.....|..:
  Fly   983 G--QRCDQCENYFYGFSSEG--------------CKPC----ECDESGSKGFQCDQNGQCPCNDN 1027

  Fly   821 IHNERCNKAAEVPPEQ------LPE--------LALHKSKVLE-------------TKDNGEAAK 858
            :...||::..|...::      .|:        ..||::|:..             |.|:...||
  Fly  1028 VEGRRCDRCKENKYDRHRGCIDCPDCYNLVQDAADLHRAKLFNLSQTLDEIARTPVTNDDEFEAK 1092

  Fly   859 ------KVSGLAH----------KKHSKKHRNLHKPTP----------------------ATSTT 885
                  ||:.||.          :.:::...:|||...                      |....
  Fly  1093 LKAVQEKVAVLAQDARDNSGDGGQTYAEVIDDLHKHLDSVREHLVSADKFQADANGEIDRARQNY 1157

  Fly   886 TSTTSTTTTT--------------------------------TEAPSERTEEATAGALSNEEIED 918
            |.....|...                                :|..|:.:.||.|.|   :::|.
  Fly  1158 TILDQITENAKKELQQALDLLNDEGAQALARAKEKSVEFGQQSEQISDISREARALA---DKLES 1219

  Fly   919 DIIFRLVQQQQQQKELKKQHQ--------QTTTTAPATSTTSSGPSKAKPRLSGKHHASKHEHHL 975
            :..|.|...:..:..::|.||        |........|......|..|..|......|| |...
  Fly  1220 EAQFDLKNAKDAKDAVEKAHQLAKSAIDLQLKIGTELRSEVGLELSHVKQSLGTVVQTSK-EALR 1283

  Fly   976 KPNAAFTRKLSRLPTHYESFQTNPDSDI--------------------------------LTFED 1008
            |.|..:...|:.|  :..:.||.|:.||                                ..||.
  Fly  1284 KANEVYDTALTLL--NDVNRQTQPEIDISQLKKDAVAANERADELLKQITELSNSNGELFADFET 1346

  Fly  1009 NNDWVTSL----QQQEYGDAMAASQVPLAFEDASPGTPRSSDNNEDDENAFV----FDESLFDAS 1065
            ..:...:|    :||:..|.....:...|.:.|:....:..:..::..|.:.    |...:..:|
  Fly  1347 EQELTEALLKRAEQQQLEDIELLERAKAAHDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSS 1411

  Fly  1066 DGTEEYQR------KQLAQDMKRIMS---------NSNAHSSHK---KAEVQFPPQGSQ------ 1106
            :..|:..:      |:: |:.:.::|         |.||:.:.|   :|::::..|.|:      
  Fly  1412 ESAEKALQTVPNIEKEI-QNAESLISQAEEALDGANKNANEAKKNAQEAQLKYAEQASKDAELIR 1475

  Fly  1107 ----EVGTANEDTSQYSDDYNDDELLTPVMQGGEEVKLEQHTSSTPQTHTDWSLLKKFDLSAEHQ 1167
                |...|..:..:.:|..|            ..|||           |:..:.|..:.|.:..
  Fly  1476 RKANETKVAARNLREEADQLN------------HRVKL-----------TEMDIFKLEESSTKDD 1517

  Fly  1168 SQVQGVRKNFGACFAGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHD 1232
            :.|...::..|...|.:.        :...|:...:.||. .||...||                
  Fly  1518 NLVDDAKRKVGQAKADTQ--------EAQKQIEKANADLT-AIKDELEN---------------- 1557

  Fly  1233 DYLSLGIEQGYLHFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRNSQEGYLEVDG-RKTVTLRAP 1296
                          ..|:.:|::|...|.....:|..:||. :....|.|.|... :|.:..:..
  Fly  1558 --------------LKDINTGDLDRLENRLATVEGEINRVN-LTGRIEKYREQRTIQKNLIDKYD 1607

  Fly  1297 GKLRQLNTDT---GLYVGGMPD 1315
            .:||:|..:.   ||....:||
  Fly  1608 AELRELKDEVQNIGLISKALPD 1629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_001286474.1 FXa_inhibition 53..82 CDD:291342 9/33 (27%)
LamG 404..555 CDD:238058 20/150 (13%)
EGF 583..612 CDD:278437 12/30 (40%)
LamG 625..774 CDD:238058 33/192 (17%)
LamG 1205..1340 CDD:214598 24/115 (21%)
LanB2NP_001287009.1 LamNT 61..296 CDD:214532
EGF_Lam 298..347 CDD:238012
Laminin_EGF 359..414 CDD:278482 13/39 (33%)
EGF_Lam 414..458 CDD:214543 7/43 (16%)
Laminin_EGF 461..511 CDD:278482 12/75 (16%)
LamB 572..697 CDD:214597 24/124 (19%)
TNFRSF <721..848 CDD:304602 43/261 (16%)
CRD2 724..771 CDD:276900 15/90 (17%)
EGF_Lam 743..791 CDD:238012 14/127 (11%)
Laminin_EGF 847..897 CDD:278482 9/66 (14%)
Laminin_EGF 902..953 CDD:278482 4/50 (8%)
Laminin_EGF 956..1004 CDD:278482 13/66 (20%)
Laminin_EGF 1004..1050 CDD:278482 8/49 (16%)
V_Alix_like 1122..1443 CDD:187408 50/327 (15%)
Tar 1139..1521 CDD:223910 64/411 (16%)
BAR 1308..1469 CDD:299863 23/161 (14%)
vATP-synt_E 1474..>1629 CDD:304907 36/217 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10574
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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