DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and lamb1a

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_775382.1 Gene:lamb1a / 286830 ZFINID:ZDB-GENE-021226-1 Length:1785 Species:Danio rerio


Alignment Length:1662 Identity:283/1662 - (17%)
Similarity:472/1662 - (28%) Gaps:630/1662 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HHHHHCRV-VCVWLLLVLSSLSSASIAVGAIPEPEEAAFQGHCGHTSP---------------CE 54
            ||.|.|.. :.|:       .:|.:::.|...:.:......:|....|               ||
Zfish   336 HHSHSCHFDMAVY-------RASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNICE 393

  Fly    55 Q------------LCYEIHD---GMY--ECDC---IEG----------YELNKNGYSCQVINATS 89
            .            :|..:.|   |:.  :|.|   :||          |.|:::...||  ..|.
Zfish   394 PCNCDPVGSLNGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQ--PCTC 456

  Fly    90 NSL---DGRGKSDEDVLYQKGASFSAKLANDDGGKSMAKSTFALSAAQSASPAGNENGEDESGSE 151
            |:|   .|....|.|    .|..:..:|.............:.||             .|..|..
Zfish   457 NALGTVPGGSPCDTD----SGNCYCKRLVTGRNCDQCLPQHWGLS-------------NDMDGCR 504

  Fly   152 GDSYDYGELEDSN-SETQEQKQKSLNLQQQQQQQQKVNSNDYYISAESINFNSESEGQEQQDVAD 215
            ....|:|...::| |....|.|...::..::..|  |.|..|:|:.:...:.:|.        |.
Zfish   505 PCDCDHGGAINNNCSPVSGQCQCREHMFGRRCDQ--VESGFYFIALDHYTYEAEE--------AK 559

  Fly   216 FKAASTMLPSSVPPTPSRSTT-------------------------------------------R 237
            |....|::|.:.|...|.:.|                                           .
Zfish   560 FGPGVTVVPRNHPQDRSPTWTGIGFVNVPEGAFLEFSIDNIPYSMEYDLIIRYEPQLPEQWEEVL 624

  Fly   238 ATASTTTTTTTTRRSPTRAP---KQRVDVDYG-------------EGDGSDDYSYSYKSDMSVYD 286
            .|.......|...|.....|   .|.|.:..|             ||     .:|:.:..:|:|.
Zfish   625 MTVIRPRVITADSRCANTMPDDDNQMVSLHPGSRYVVLPRPVCFEEG-----LNYTVRLSLSLYS 684

  Fly   287 DVNNNQ---------------LNLRRNSKSQTYQQTSNTNTA-KNRRKYPNVTSNKVQMHITRET 335
            .:::.|               .||...|.|.|......||:| :|.::|                
Zfish   685 ALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGTEGGNLVTNSAWENFQRY---------------- 733

  Fly   336 NRLENISAAEPAVVGAAMT-------------TDRSTPTCNLDCGSDGICALEATAASSRCLCPF 387
            ..|||    ..|||...||             ..:....|  .|...|..:.....:..:|.|..
Zfish   734 RCLEN----SQAVVKTPMTDICRNYIFSVSALLHQGVKAC--QCDPQGSLSTVCDPSGGQCQCRP 792

  Fly   388 GKTGNGCQEDIRAHVPRFAKRSWLAFPALHGAYKHVQLRIEFRPESFDGIILLSGERDDLTGDFM 452
            ...|..|.        |.|..::|..|  .|.          ||                     
Zfish   793 NVVGRNCD--------RCAPATFLFXP--QGC----------RP--------------------- 816

  Fly   453 ALLLNKGFVEFWFDCGSGVGSVRSRETILLNEWNSVIIYRHRWDAWLVLNHGTKVQGRSN---GL 514
                        .|| |..|||.|              |.|            :..|:..   |.
Zfish   817 ------------CDC-SPEGSVHS--------------YCH------------EATGQCECIAGA 842

  Fly   515 FSRITFREPVFLGGIGNITGLAKRLPLAEGFAGCIRRFVANEHDYKF---TEHPLG--DVINGFD 574
            :.|...|                .||...||..| |....|.|..:.   |...|.  |...|.:
Zfish   843 YGRQCDR----------------CLPGYWGFPNC-RPCTCNGHAEQCDPQTGQCLSCRDHTTGHN 890

  Fly   575 IQDC-----------STDKCVRYPC----------QHGGKCL--PSDQGAICLCPIGFVGDLCEI 616
            .:.|           |.|.|  .||          |..|.|.  |......|:|..|:.|..|| 
Zfish   891 CERCLGGYYGDPVLGSGDHC--RPCMCPDGPGSGRQFSGACYKSPDSSQVFCVCNQGYKGARCE- 952

  Fly   617 RMDLQVPAFNGSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSGPE----HRGDFI-ALYLN 676
               ...|.:.|:..              |:....:|.|.:..|....||    ..|..: .||..
Zfish   953 ---ECAPGYYGNPH--------------EVGGECRPCQCNSNIDMMDPESCDARTGACVKCLYHT 1000

  Fly   677 DGFVEFAFDLG-SGPALVRSEHSLSLGQWHTIKISRTARLAVLKVDKHQEVLTISSNGFWHLSLD 740
            :|.......|| .|.||.:|.......|..|:                :|:.....|....|:..
Zfish  1001 EGESCNRCRLGYYGNALTQSCRKCVCNQMGTV----------------EEMCPSPGNCNCDLTSG 1049

  Fly   741 QNLFVGGV--NHVDRLPLDLKYKPFFVGCIQRIDIN-GHSLGIVAEALGGSNIGNCPHAC----- 797
            |.|.:..|  .|.|:...|........|| :..|.: .||.|.....:    :|.|  :|     
Zfish  1050 QCLCLPNVVGQHCDQCAPDTWNMASGKGC-EDCDCDPNHSFGSSCNEI----MGQC--SCKPGFG 1107

  Fly   798 --VARPCGPLAECVPQMESYECRC---SIHNERCNK-----------------------AAEVP- 833
              ..|.|..|....|:::.:.|.|   .|..::|||                       ..|.| 
Zfish  1108 GRTCRECRELFWGNPEVKCHACDCDPRGIAEQQCNKVTGHCVCVEGVSGPRCDTCARGYTGEFPQ 1172

  Fly   834 ------------------PEQLPELALHKSKVLETKDNGEAAKKVSGLAHKKHSKKHRNLHKPTP 880
                              ..|...|....:.:..|...|.....::.:.:..:|  .||:....|
Zfish  1173 CERCHQCFAEWDIIVGDLTNQTHRLVQKVNTIKATGITGPYQATINNVENSANS--IRNILAQNP 1235

  Fly   881 ATSTTTSTTSTTTTTTEAPSER------TEEATAGALSNEEIEDDIIFRLVQQQQQQ-----KEL 934
            ||...|.........|...:|.      ||| |...:|::....|...:.::::.|:     |:|
Zfish  1236 ATQPLTEIQGLLEQATALMAEMNSNLNLTEE-TLSEISSDNNSTDTKLKSLKEEAQKLEQTVKDL 1299

  Fly   935 KKQHQQTTTT----APATSTTSSGPSKAKPRLSGKHHASKHEHHLKPNAAFT------RKLSRLP 989
            ::|.:....:    |.|:.|              :::.......::.||:.|      .:.:.|.
Zfish  1300 REQVEFVKNSDIRGARASVT--------------RYYEQSQNAEIRANASTTDPYNLVNQSATLR 1350

  Fly   990 THYESFQTNPDSDILTFEDNNDWVTSLQQQEYG---DAMAASQVPLAFEDASP---GTPRSSDNN 1048
            |..|.....      |.|:.|.     :|.|:.   |.:|.....|...:.|.   |:|..|:|.
Zfish  1351 TETEELMNQ------TKEEFNQ-----RQDEFSKKLDNLAGQLETLDLSELSEKTCGSPAGSENC 1404

  Fly  1049 EDD--------------------------------ENAFVFDESLFDASDGTEEYQRKQLAQDMK 1081
            .|.                                :.|..||..:..|.:..::         :.
Zfish  1405 ADSRCGGLSCVDMQGSRKCGGEGCDGLTTLAHNAWQKAKDFDLEIISAMEEVDK---------LS 1460

  Fly  1082 RIMSNSNAHSSHKKAEVQFPPQGSQEVGTANEDTSQYSDDYNDD--ELLTPV----MQGGEEVK- 1139
            :::|.:...:...|.       .:|||.....:|.:..|..|::  :|:..:    .|.|.::: 
Zfish  1461 KMVSEAKVKADEAKL-------NAQEVLAKTNETKKRVDSSNEELRQLIKQIRDFLTQDGADLES 1518

  Fly  1140 --------LEQHTSSTPQTHTDWSLLKKFDLSAEHQSQVQGVRKNFGACFAGSDSYFHYNDADTM 1196
                    |:....:||               |:.|:..:.:|:..|:             ...:
Zfish  1519 IEAVANEVLQMQMPTTP---------------AQLQNLTEEIRERVGS-------------LTDV 1555

  Fly  1197 SQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHDDYLSLGIEQGYLHFRYDLGSGEVDIRFNG 1261
            ..:::.|....||.::      :|...|:...|..                        |::...
Zfish  1556 EDILNQSAADILRAES------LLEQARKARKEAS------------------------DVKSTA 1590

  Fly  1262 TKVSDGLWHRVRAIRNS-----QEGYLEVDGRKTVTLRAPGKLRQLNTDTGLYVGGMPDVGYFTH 1321
            ..|.:.|.|..|| :||     ::..:::.|.:.:.:....:    .:|:.|.:...      |.
Zfish  1591 EMVKEALQHAERA-QNSVAEALKQAAVDIKGTQDLLVSVESE----TSDSELKLSNA------TR 1644

  Fly  1322 QRYFSGIVGCISEIVLAGEMKLNFDPNTLGTEHNVET 1358
            :     ::...|::.|..|..||...:...||...|:
Zfish  1645 R-----LLKLESDVALLKEKALNTSISANSTEKEAES 1676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251 11/58 (19%)
LamG 404..555 CDD:238058 26/153 (17%)
EGF 583..612 CDD:394967 10/40 (25%)
LamG 625..774 CDD:238058 31/156 (20%)
LamG 1205..1340 CDD:214598 19/139 (14%)
lamb1aNP_775382.1 Laminin_N 31..266 CDD:459653
EGF_Lam 268..320 CDD:238012
Laminin_EGF <353..382 CDD:395007 3/28 (11%)
EGF_Lam 394..452 CDD:238012 9/57 (16%)
EGF_Lam 453..504 CDD:238012 12/67 (18%)
EGF_Lam 505..548 CDD:238012 11/44 (25%)
EGF_Lam 769..814 CDD:214543 11/56 (20%)
Laminin_EGF 817..865 CDD:395007 19/91 (21%)
EGF_Lam 862..907 CDD:238012 7/44 (16%)
Laminin_EGF <934..969 CDD:395007 9/52 (17%)
Laminin_EGF 972..1018 CDD:395007 12/45 (27%)
Laminin_EGF 1024..1078 CDD:395007 11/69 (16%)
Laminin_EGF 1081..1129 CDD:395007 11/53 (21%)
Laminin_EGF 1129..>1168 CDD:395007 6/38 (16%)
Myosin_tail_1 1247..>1756 CDD:460256 83/546 (15%)
cc_LAMB1_C 1712..1784 CDD:411971
Blue background indicates that the domain is not in the aligned region.

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