DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and Lamb3

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_032510.2 Gene:Lamb3 / 16780 MGIID:99915 Length:1168 Species:Mus musculus


Alignment Length:1276 Identity:239/1276 - (18%)
Similarity:397/1276 - (31%) Gaps:396/1276 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CGHTSPCEQLCYEIHDGMYECDCIEGYELNKNGYSCQVINATSNSLDGR-GKSDEDVLYQKGASF 110
            ||.|.| |..|.:......:| |.....|.:|..|.:|.|..|:|...| .:|..||     :..
Mouse    47 CGLTKP-ETYCTQYGQWQMKC-CKCDSRLPRNYNSHRVENVASSSGPMRWWQSQNDV-----SPV 104

  Fly   111 SAKLANDDGGKSMAKSTFALSAAQSASPAGN--ENGEDESGSEGDSYDYGELEDSNSETQEQKQK 173
            |.:|   |..|.|......:. .:..:|||.  |...| .|.....|.|...:.:::..|..:.:
Mouse   105 SLQL---DLDKRMQLQDIMMD-FKGLTPAGMLIERSSD-FGKTWRVYQYLATDCASTFPQVHQGQ 164

  Fly   174 SLNLQQQQQQQQKVNSNDYYISAESINFNSESEGQEQQDVADFKAASTMLPSSVPPTPSRSTTRA 238
            ..|.|..:.:......|.:.           :.|:.|.::.|       |.|::|.:.|:.....
Mouse   165 PKNWQDVRCRPLSQRPNGHL-----------TGGKVQLNLMD-------LASAIPASQSKKIQEL 211

  Fly   239 TASTTTTTTTTRRSPTRAPKQRVDVDYGEGDGSDDYSYSYKSDMSVYDDVNNNQLNLRRN----- 298
            ...|......|:.:|  .|::.              ||...:..:|      :||.|:.:     
Mouse   212 GDITNLRVNFTKLAP--VPQRG--------------SYPPSAYFAV------SQLRLQGSCFCHG 254

  Fly   299 ---------SKSQTYQQTSNTNTAKNRRKYPNVT------SNK----VQMHITRETNRLENISAA 344
                     ..|.|..|.:|....::....||..      :|:    .:...|.|..|.:....:
Mouse   255 HADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQRCDCNGHS 319

  Fly   345 E-----PAVVGAAMTTDRSTPTCNLDCGSDGICALEATAASSRCLCPFGKTGNGCQEDIRAHVPR 404
            |     |||..|:..|            :.|:|.          .|.....|..|:   |..:..
Mouse   320 ETCHFDPAVFAASQGT------------NGGVCD----------NCRDHTEGKNCE---RCQLHY 359

  Fly   405 FAKRSWLAFPALHGAYKHVQLRIEFRPESFDGIILLSGERDDLTGDFMALLLNKGFVEFWFDCGS 469
            |..|...|  .:|    ...:..|..|   ||.: .....|.|||                .|  
Mouse   360 FRNRRPSA--PIH----ETCIPCECDP---DGAV-QGAPCDRLTG----------------QC-- 396

  Fly   470 GVGSVRSRETILLNEWNSVIIYRHRWDAWLVLNHGTKVQGRSNGL----FSRITFREPVFLGGIG 530
                       :..|:                     |||....|    |:.:||..|.......
Mouse   397 -----------VCKEY---------------------VQGERCDLCKPGFTGLTFANPKGCHACD 429

  Fly   531 -NITGLAKRLPLAE--GFAGCIRRFVANEHDYKFTEHPLGDVINGFDIQDCSTD-------KCVR 585
             :|.|..|.:|..|  |...|:...|..:.|.....|  ..:.:|...:.|:.|       :|.:
Mouse   430 CSILGARKDMPCEEETGRCLCLPNVVGPKCDQCAPSH--WKLASGLGCEPCACDPRNSLSSQCNQ 492

  Fly   586 Y----PCQHGGKCLPSDQGAICLCP---IGFVGDLCEIRMDLQVPAFNGSSFLRYAPLGDSALIW 643
            :    ||:.|...|.....||..||   .|.|...|. ..|..   |.|:.       |...   
Mouse   493 FTGQCPCREGFGGLTCSSAAIRQCPDQTYGHVATGCR-ACDCD---FRGTE-------GPGC--- 543

  Fly   644 LELKVTLKPEQADGLIL----YSGPE----HRGDF----IALYLNDGFVEFAFDLGSGPALVRSE 696
                     ::|.|..|    ::||.    .||..    :.:..:..|..:..||......:.|.
Mouse   544 ---------DKASGRCLCRPGFTGPRCDQCQRGHCDRYPVCVACHSCFQAYDTDLQEQARRLHSL 599

  Fly   697 HSLSLGQW-------HTIKISRTARL--AVLKVDKHQEVLTISS----------NGFWHLSLDQN 742
            .:.:.|.|       |.:    .:||  |..|:::.:::|..:|          ||.  ||:.:.
Mouse   600 RNATEGLWTGTGLEDHGL----ASRLLDAKSKIEQIRQILEGTSVTEQDVAQVANGI--LSIRRT 658

  Fly   743 LFVGGVNHVDRLPLDLKYK---PFFVGCIQRIDINGHSLGIV-------AEALGGSNIGNCPHAC 797
            |        ..|||||..:   ..|.|.:..:|.:...|.::       .|.|...:        
Mouse   659 L--------QGLPLDLPLEEEMESFSGDLGNLDRSFSRLLLMYRSKKEQFEKLSSED-------- 707

  Fly   798 VARPCGPLAECVPQMESYECRCSIHNERCNKAAEVPPEQLPELALHKSKVLETKDNGEAAKKVSG 862
               |.|...           ..::..|:.::||    :|:.:.:...|::.:::...|..::.:|
Mouse   708 ---PSGAFR-----------MLTMAYEQSSRAA----QQVSDSSSLLSQLRDSRREAEGLERQAG 754

  Fly   863 ---------LAHKKHSKKHRNLHKPTPATSTTTS-TTSTTTTTTEAPSE--RTEEATA------G 909
                     :|.:.......:|   ||..:.... :..|..|..:.|.|  ..:..||      |
Mouse   755 GGGTGGAQLMALRLEMASLPDL---TPTINKLCGRSRQTACTPGDCPGELCPQDNGTACGSHCRG 816

  Fly   910 ALSNEEIEDDIIFRLVQQQQQQKELKKQHQQTTTTAPATSTTSSGPSKAKPRLSGKHHASKHEHH 974
            ||...:....:..|:.   :|.:....|.|||.....|....:|.......||  :...|.....
Mouse   817 ALPRAKGAFHMAGRVA---EQLRNFNTQLQQTRQMIRAAEEAASRVQADAQRL--ETQVSTSRLL 876

  Fly   975 LKPNAAFTRKLSRLPTHYESFQTNPDSDILTFEDNND-----W---------------------- 1012
            ::.:...||.|.:   ....|.|:||:|..|.:..::     |                      
Mouse   877 MEEDVQRTRLLIQ---QVRGFLTDPDTDAATIQQVSEAVLALWLPTDSATVLRKMKEIQAIAARL 938

  Fly  1013 --VTSLQQQEYGDAMAASQVPLAFEDASPGTPRSSDNNEDD------ENAFVFDESLFDASDGTE 1069
              |.|:..|...|...|.::....|.|. ....:.:...||      :......|:. |...||.
Mouse   939 PNVDSVLSQTKQDIARARRLQAEAEQAR-SRAHAVEGQVDDVVGNLRQGTVALQEAQ-DTMQGTG 1001

  Fly  1070 EYQR----------------KQLAQDMKRIMSNSNAHSSHKKAEV-----------QFPPQGSQE 1107
            ...|                ::|.:.||..||...|.....:.:.           |.....||:
Mouse  1002 RSLRLIQERVGEVQQVLVPAERLVKGMKEQMSGFWARMKELRRQAQEEQAQAMQARQLAEGASQQ 1066

  Fly  1108 VGTANEDTSQYSDDYND--DEL-LTPVM--QGGE--EVKLE 1141
            ...|.|...:....|.:  |.| .:||:  ||..  .:|:|
Mouse  1067 AMNAQEGFKRLKQKYTELKDRLGQSPVLGEQGNRILSIKME 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251 6/28 (21%)
LamG 404..555 CDD:238058 30/157 (19%)
EGF 583..612 CDD:394967 11/35 (31%)
LamG 625..774 CDD:238058 36/182 (20%)
LamG 1205..1340 CDD:214598
Lamb3NP_032510.2 Laminin_N 20..248 CDD:470680 53/252 (21%)
EGF_Lam 249..301 CDD:238012 7/51 (14%)
Laminin_EGF 313..367 CDD:395007 14/78 (18%)
Laminin_EGF 376..425 CDD:395007 18/102 (18%)
Laminin_EGF 428..475 CDD:395007 11/48 (23%)
Laminin_EGF 478..531 CDD:395007 14/53 (26%)
EGF_Lam 530..579 CDD:238012 11/70 (16%)
Domain II 576..781 42/247 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 723..760 6/40 (15%)
Domain alpha 782..812 6/29 (21%)
Domain I 813..1168 58/305 (19%)
SMC_prok_B <830..1161 CDD:274008 55/288 (19%)
cc_LAMB_C 1098..1168 CDD:424069 3/10 (30%)
Blue background indicates that the domain is not in the aligned region.

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