DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and Lamb2

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_032509.2 Gene:Lamb2 / 16779 MGIID:99916 Length:1799 Species:Mus musculus


Alignment Length:129 Identity:30/129 - (23%)
Similarity:46/129 - (35%) Gaps:29/129 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KGSRHEQEKLLRVSSTLYVGNLSFYTTEEQIHELFSRCGDVRRIIMGLDKFKKTPCGFCFVEYYS 88
            :|..:||.|.:||......|.....:|            :|...|:..|:....|.....|:..:
Mouse   426 RGFDYEQMKSVRVCVKAQDGGSPPLST------------NVTLDIIIQDQNDNAPQVLYPVQTGA 478

  Fly    89 RLDAESAMRYINGTRLDDRIVRVDWDAG-----------------FIEGRQYGRGKTGGQVRDE 135
            .:.||...|..:...|..::|.||.|:|                 |..|.|.|..:|..||.|:
Mouse   479 SVVAEIVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251 4/28 (14%)
LamG 404..555 CDD:238058
EGF 583..612 CDD:394967
LamG 625..774 CDD:238058
LamG 1205..1340 CDD:214598
Lamb2NP_032509.2 Laminin_N 50..284 CDD:459653
EGF_Lam 286..338 CDD:238012
Laminin_EGF 350..401 CDD:395007
Laminin_EGF 413..470 CDD:395007 12/55 (22%)
Laminin_EGF 473..527 CDD:395007 11/53 (21%)
EGF_Lam 524..565 CDD:238012 8/19 (42%)
EGF_Lam 784..829 CDD:214543
Laminin_EGF 832..880 CDD:395007
Laminin_EGF 878..925 CDD:395007
EGF_Lam 927..985 CDD:238012
Laminin_EGF 987..>1029 CDD:395007
Laminin_EGF 1039..1093 CDD:395007
Laminin_EGF 1096..1144 CDD:395007
Laminin_EGF 1144..1191 CDD:395007
Domain II 1191..1410
SMC_prok_B <1204..1571 CDD:274008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1339..1365
Domain alpha 1411..1443
Domain I 1444..1799
Smc <1446..>1787 CDD:440809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1679..1701
cc_LAMB2_C 1728..1799 CDD:411970
Blue background indicates that the domain is not in the aligned region.

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