DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SP2353 and hspg2

DIOPT Version :9

Sequence 1:NP_001286474.1 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:XP_031762624.1 Gene:hspg2 / 100494785 XenbaseID:XB-GENE-6465357 Length:4576 Species:Xenopus tropicalis


Alignment Length:1469 Identity:309/1469 - (21%)
Similarity:498/1469 - (33%) Gaps:534/1469 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SIAVGAIPEPEEAAFQGHC-GH-TSPCEQLCYEIHDGMYECDCIEGYELNKN--------GYSCQ 83
            |::||.:       .|..| .| |||.:....:::..:.:...:....|:.|        .|.|.
 Frog  3496 SVSVGEV-------IQIQCLAHGTSPLKFQWSKVNGSLPDRATVRDSTLHINLAKAADAGTYRCV 3553

  Fly    84 VINATSNS--------LDGRGKSDEDVLYQKGASFSAKLANDDGGKSMAKSTFALSAAQSASPAG 140
            |.|...:|        |.........::..|..|.:|:......|...|:..::....|  .|||
 Frog  3554 VGNKVGSSEAFAQVSVLAPFAVRVSPLIDTKAVSGTAEFTCTVVGDPRARIQWSKEGGQ--LPAG 3616

  Fly   141 N--ENG-----EDESGSEGD-----SYDYGELEDSNSETQEQKQKSLNLQQQQQQQQKVN---SN 190
            :  :.|     ..|||:||.     |..:|           |.|:|:.|..|...:.::|   |.
 Frog  3617 HQVQGGVLRIPNLESGNEGTYTCRVSSRFG-----------QAQESVRLVLQALPKVRINIRTSV 3670

  Fly   191 DYYISAESINFNSESEGQEQQDVADFKAASTMLPSSVPPTPSRSTTRATASTTTTTTTTRRSPTR 255
            ...::..|:.|...:.|..:..|...|..|.:...:|   .|..|.|.                 
 Frog  3671 QTVLAGNSVEFECLALGDPRAKVTWSKVGSRLPGDAV---ISGGTLRI----------------- 3715

  Fly   256 APKQRVDVDYGEGDGSDDYSYSYKSDMSVYDDVNNN---------QLNLRRNSKSQTYQQTSNTN 311
              :|....|.|:      |..:..:|:.   :|.::         |:..:...|..|...|:...
 Frog  3716 --EQVKQSDAGQ------YRCTAANDVG---EVQSHVILHVQSVPQIAAQPEMKEITAGSTAVFP 3769

  Fly   312 TAKNRRKYPNVTSNKVQMHITRE---TNRLENISAAEPAVVGAAMTTDRSTPTCNLDCGSDGICA 373
            ...:....|::|.:|::..:..:   .|.:..|.:.:|        .|..|..|           
 Frog  3770 CLASGFPVPDITWSKLEGDLPSDHQIDNNVLTILSVKP--------EDAGTYVC----------- 3815

  Fly   374 LEATAASSRCLCPFGKTGNGCQEDIRAH-VPRFA--KRSWLAFPALHGAYKHVQLRIEFRPESFD 435
               |||:.:     |:........:|.. ||.|.  .:|:|:.|::..|:|.::::|.|||::.|
 Frog  3816 ---TAANRQ-----GRVTAFSMLKVRERVVPYFTGQPQSYLSLPSIKDAHKKLEIKITFRPDTAD 3872

  Fly   436 ------GIILLSGERDDLTGDFMALLLNKGFVEFWFDCGSGVGSVRSRETILLNEWNSVIIYRHR 494
                  |:::.||::.....||::..|..|..||.||.|||:.::|....|.|.|:::|.:||:.
 Frog  3873 ALILYSGMLVYSGQKKSNGADFVSFGLVGGRPEFRFDAGSGMATIRYPTAISLGEFHTVTLYRNL 3937

  Fly   495 WDAWLVLNHGTKVQGRSNGLFSRITFREPVFLGGIGNITGLAKRLPLAEGFAGCIRRFVANEHDY 559
            ....||::....|.|.|.|.|..:...|.:||||..:...::| ..|..||.||:|:.:....:.
 Frog  3938 TQGSLVVDRHVPVNGTSQGKFQGLDLNEELFLGGYSHYDSISK-TGLNSGFVGCVRQLIIQGEEV 4001

  Fly   560 KFTEHPLGDVINGFDIQDCSTDKCVRYPCQHGGKCLPSDQGA-ICLCPIGFVGDLCEIR------ 617
            .|.:..|.  .||  :.:|.|  |...||::.|.|..|:..: :|:|..||.|..||..      
 Frog  4002 IFKDLDLS--ANG--VSNCPT--CRDRPCKNRGTCQDSESSSYVCVCSAGFTGSNCEHSQALHCH 4060

  Fly   618 --------------------------------MD---LQVPAFNG-SSFLRYAPLGDSALIWLEL 646
                                            ||   :..|:||| ||::.|..|.:   |..||
 Frog  4061 PEACGPDATCINRADGQGYTCRCHLGKSGEKCMDGTMVNTPSFNGDSSYISYPSLTN---IHNEL 4122

  Fly   647 KVTL--KPEQADGLILYSGPEHR--GDFIALYLNDGFVEFAFDLGSGPALVRSEHSLSLGQWHTI 707
            :|.|  ||...|||:.:||.:..  .||:::.:..|::||.::||||.|::||...::|||||.:
 Frog  4123 RVDLEFKPISPDGLLFFSGGKAAPVEDFVSIAMVGGYLEFRYELGSGLAILRSLEPVTLGQWHKV 4187

  Fly   708 KISRTARLAVLKVDKHQEVLTISSNGFWHLSLDQNLFVGGVNHVDRLPLDLKYKPFFVGCIQRID 772
            ...|..:...|.||....|...:......|:|...:::|||:....||........|.|||..:.
 Frog  4188 SAERVNKDGTLIVDGTDPVKRSAPGKSQGLNLKTLMYLGGVDGSVELPSAANISRHFQGCIGEVS 4252

  Fly   773 INGHSLGIVAEALGGSNIGNC--PHACVARPCGPLAECVPQME-SYEC---------RCSIHNER 825
            |||..:.|.......|.||.|  ...|...||.....|.|..| .|:|         ||..|.::
 Frog  4253 INGKKVDISYSFTESSAIGQCYDNSPCDRMPCLHGGRCQPTGEYEYQCLCLDGFKGDRCETHEDQ 4317

  Fly   826 CNKAAEVPPEQLPELALHKSKVLETKDNGEAAKKVSGLAHKKHSKKHRNLHKPTPATSTTTSTTS 890
            |.              :|...:     ||...             |....|.|:..:.|...   
 Frog  4318 CQ--------------IHNPCL-----NGATC-------------KDNRCHCPSGYSGTICE--- 4347

  Fly   891 TTTTTTEAPSERTEEATAGALSNEEIEDDIIFRLVQQQQQQKELKKQHQQTTTTAPATSTTSSGP 955
                         ...||||                                             
 Frog  4348 -------------HGRTAGA--------------------------------------------- 4354

  Fly   956 SKAKPRLSGKHHASKHEHHLKPNAAFTRKLSRLPTHYESFQTNPDSDILTFEDNNDWVTSLQQQE 1020
                                                                ::.||        
 Frog  4355 ----------------------------------------------------EDRDW-------- 4359

  Fly  1021 YGDAMAASQVPLAFEDASPGTPRSSDNNEDDENAFVFDESLFDASDGTEEYQRKQLAQDMKRIMS 1085
                                                                             
 Frog  4360 ----------------------------------------------------------------- 4359

  Fly  1086 NSNAHSSHKKAEVQFPPQGSQEVGTANEDTSQYSDDYNDDELLTPVMQGGEEVKLEQHT-----S 1145
                           |.:||    ..|:....|...::||..          :.|.:|.     .
 Frog  4360 ---------------PVEGS----GGNDAPGLYGSFFSDDSY----------IALPKHVFPRSRP 4395

  Fly  1146 STPQTHTDWSLLKKFDLSAEHQSQVQGVRKNFGACFAGSDSYFHYNDADTMSQVISYSIDLNLRI 1210
            ..|:|                                                       :.|.|
 Frog  4396 EAPET-------------------------------------------------------IELEI 4405

  Fly  1211 KTHSENGVILWTGR---------QGTTEEHD------DYLSLGIEQGYLHFRYDLGSGEVDIRFN 1260
            :|.|..|||||.|.         .||.:|.:      |::|||::.|:|.|.|.|||||.:|| :
 Frog  4406 RTSSSEGVILWQGMVSHSSENHLLGTNQEENEQSKGKDFISLGLKDGHLVFSYQLGSGEANIR-S 4469

  Fly  1261 GTKVSDGLWHRVRAIRNSQEGYLEVDGRKTVTLRAPGKLRQLNTDTGLYVGGMPDVGYFTHQRYF 1325
            ...|:||.|||:.|:|..:.|.:::||..:|:..:||:...:||...:|:||.|:|...|..::.
 Frog  4470 EDPVNDGEWHRIVAVREGKLGSIQIDGEDSVSGASPGRNIMVNTKGSVYLGGAPNVKTLTGGKFS 4534

  Fly  1326 SGIVGCISEIVLAGEMKLNFDPN-----TLGTEHNVETG 1359
            |||.|||..:|:     ||..|:     .:..:|:.|.|
 Frog  4535 SGINGCIKNLVI-----LNARPSQQPHQPIDLKHHAEAG 4568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_001286474.1 FXa_inhibition 53..82 CDD:291342 3/36 (8%)
LamG 404..555 CDD:238058 51/158 (32%)
EGF 583..612 CDD:278437 10/29 (34%)
LamG 625..774 CDD:238058 52/153 (34%)
LamG 1205..1340 CDD:214598 57/149 (38%)
hspg2XP_031762624.1 SEA 123..234 CDD:413344
LDLa 252..286 CDD:238060
LDLa 350..384 CDD:238060
LDLa 390..424 CDD:238060
Ldl_recept_a 431..468 CDD:395011
Ig_Perlecan_like 486..563 CDD:143220
Ig strand B 489..493 CDD:143220
Ig strand C 502..506 CDD:143220
Ig strand E 527..531 CDD:143220
Ig strand F 541..546 CDD:143220
Ig strand G 555..558 CDD:143220
Laminin_B 660..794 CDD:395006
EGF_Lam 829..871 CDD:238012
Laminin_EGF 879..934 CDD:395007
Laminin_EGF 941..983 CDD:395007
Laminin_B 1054..1188 CDD:395006
EGF_Lam 1222..1271 CDD:238012
EGF_Lam 1272..1326 CDD:238012
Laminin_EGF 1333..1380 CDD:395007
PHA03378 <1499..1596 CDD:223065
Laminin_B 1655..1787 CDD:395006
EGF_Lam 1821..1870 CDD:238012
EGF_Lam 1872..1920 CDD:214543
Ig strand A 1936..1941 CDD:409353
IG_like 1942..2022 CDD:214653
Ig strand A' 1944..1948 CDD:409353
Ig strand B 1951..1961 CDD:409353
Ig strand C 1966..1973 CDD:409353
Ig strand C' 1974..1977 CDD:409353
Ig strand E 1989..1994 CDD:409353
Ig strand F 2001..2009 CDD:409353
Ig strand G 2012..2020 CDD:409353
IgI_Perlecan_like 2030..2115 CDD:409412
Ig strand B 2048..2052 CDD:409412
Ig strand C 2062..2066 CDD:409412
Ig strand E 2082..2086 CDD:409412
Ig strand F 2096..2101 CDD:409412
Ig strand G 2109..2112 CDD:409412
IG_like 2150..2227 CDD:214653
Ig strand A' 2152..2155 CDD:409353
Ig strand B 2161..2168 CDD:409353
Ig strand C 2174..2179 CDD:409353
Ig strand D 2187..2191 CDD:409353
Ig strand E 2193..2197 CDD:409353
Ig strand F 2206..2214 CDD:409353
I-set 2233..2345 CDD:400151
Ig strand A' 2239..2244 CDD:409353
Ig strand B 2250..2257 CDD:409353
Ig strand C 2263..2268 CDD:409353
Ig strand C' 2270..2272 CDD:409353
Ig strand E 2311..2317 CDD:409353
Ig strand F 2324..2331 CDD:409353
Ig strand G 2337..2345 CDD:409353
Ig 2353..2436 CDD:416386
Ig strand A' 2360..2364 CDD:409353
Ig strand B 2370..2376 CDD:409353
Ig strand C 2382..2387 CDD:409353
Ig strand C' 2389..2391 CDD:409353
Ig strand E 2402..2408 CDD:409353
Ig strand F 2415..2422 CDD:409353
IG 2456..2533 CDD:214652
Ig 2547..2614 CDD:416386
Ig strand B 2564..2568 CDD:409353
Ig strand C 2577..2581 CDD:409353
Ig strand E 2596..2600 CDD:409353
Ig strand F 2610..2614 CDD:409353
Ig_3 2644..2711 CDD:404760
Ig strand B 2661..2665 CDD:409353
Ig strand C 2674..2678 CDD:409353
Ig strand E 2693..2697 CDD:409353
Ig strand F 2707..2712 CDD:409353
IG_like 2744..2822 CDD:214653
Ig strand A' 2744..2749 CDD:409353
Ig strand B 2755..2762 CDD:409353
Ig strand C 2768..2773 CDD:409353
Ig strand C' 2775..2777 CDD:409353
Ig strand E 2788..2794 CDD:409353
Ig strand F 2801..2808 CDD:409353
Ig strand G 2814..2822 CDD:409353
Ig strand A 2833..2840 CDD:409353
Ig strand A' 2841..2846 CDD:409353
Ig 2844..2917 CDD:416386
Ig strand B 2851..2859 CDD:409353
Ig strand C 2863..2869 CDD:409353
Ig strand C' 2871..2873 CDD:409353
Ig strand E 2883..2888 CDD:409353
Ig strand F 2897..2904 CDD:409353
Ig strand G 2907..2916 CDD:409353
IG 2936..3017 CDD:214652
I-set 3021..3110 CDD:400151
Ig strand C 3052..3057 CDD:409353
Ig strand C' 3059..3061 CDD:409353
Ig strand D 3068..3072 CDD:409353
Ig strand E 3076..3081 CDD:409353
Ig strand F 3089..3097 CDD:409353
Ig strand G 3100..3110 CDD:409353
IG 3127..3203 CDD:214652
IG_like 3213..3290 CDD:214653
Ig strand A' 3215..3219 CDD:409353
Ig strand B 3222..3231 CDD:409353
Ig strand C 3237..3242 CDD:409353
Ig strand C' 3245..3248 CDD:409353
Ig strand D 3250..3254 CDD:409353
Ig strand E 3255..3262 CDD:409353
Ig strand F 3269..3277 CDD:409353
Ig strand G 3280..3290 CDD:409353
I-set 3300..3389 CDD:400151
Ig strand A 3304..3307 CDD:409353
Ig strand B 3318..3325 CDD:409353
Ig strand C 3331..3336 CDD:409353
Ig strand C' 3338..3340 CDD:409353
Ig strand D 3347..3351 CDD:409353
Ig strand E 3355..3360 CDD:409353
Ig strand F 3368..3376 CDD:409353
Ig strand G 3379..3389 CDD:409353
Ig_3 3399..3469 CDD:404760
Ig strand B 3416..3420 CDD:409353
Ig strand C 3429..3433 CDD:409353
Ig strand E 3448..3452 CDD:409353
Ig strand F 3462..3467 CDD:409353
IG_like 3492..3569 CDD:214653 16/79 (20%)
Ig strand B 3503..3507 CDD:409353 1/3 (33%)
Ig strand C 3516..3520 CDD:409353 0/3 (0%)
Ig strand E 3535..3539 CDD:409353 1/3 (33%)
Ig strand F 3549..3554 CDD:409353 2/4 (50%)
Ig 3577..3654 CDD:416386 20/89 (22%)
Ig strand B 3588..3597 CDD:409353 1/8 (13%)
Ig strand C 3603..3608 CDD:409353 0/4 (0%)
Ig strand C' 3611..3614 CDD:409353 1/4 (25%)
Ig strand E 3621..3628 CDD:409353 1/6 (17%)
Ig strand F 3635..3643 CDD:409353 1/7 (14%)
Ig strand G 3646..3655 CDD:409353 4/19 (21%)
Ig 3663..3745 CDD:416386 18/112 (16%)
Ig strand B 3679..3683 CDD:409353 1/3 (33%)
Ig strand C 3692..3696 CDD:409353 1/3 (33%)
Ig strand E 3711..3715 CDD:409353 1/3 (33%)
Ig strand F 3725..3730 CDD:409353 1/10 (10%)
Ig strand G 3738..3742 CDD:409353 0/3 (0%)
I-set 3749..3832 CDD:400151 17/109 (16%)
Ig strand A' 3757..3761 CDD:409353 1/3 (33%)
Ig strand B 3764..3773 CDD:409353 1/8 (13%)
Ig strand C 3779..3784 CDD:409353 1/4 (25%)
Ig strand C' 3787..3790 CDD:409353 0/2 (0%)
Ig strand E 3797..3804 CDD:409353 2/6 (33%)
Ig strand F 3811..3819 CDD:409353 4/21 (19%)
Ig strand G 3822..3832 CDD:409353 1/9 (11%)
LamG 3839..3996 CDD:238058 51/157 (32%)
EGF_CA <4023..4052 CDD:238011 10/28 (36%)
LamG 4102..4254 CDD:238058 52/154 (34%)
EGF 4279..4310 CDD:394967 8/30 (27%)
EGF_CA 4316..4347 CDD:238011 8/62 (13%)
LamG 4374..4546 CDD:238058 62/237 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D17288at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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