DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SP2353 and lama1

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:XP_004915294.2 Gene:lama1 / 100488009 XenbaseID:XB-GENE-968308 Length:3101 Species:Xenopus tropicalis


Alignment Length:1294 Identity:252/1294 - (19%)
Similarity:425/1294 - (32%) Gaps:420/1294 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LEDSNSETQEQKQKSLNLQQQQQQ-----QQKVNSNDYYISAESINFNSESEGQEQQDVADFKA- 218
            |.|.::.|..:.|:|::||...::     :|.:|        |:.|.:..:||. ..|:...|. 
 Frog  1920 LADQSNHTITEAQESVSLQSTCERSMMFSRQLLN--------EAKNLSRNTEGL-MTDLNKLKTK 1975

  Fly   219 --------------------ASTMLPSSVPP---TPSRSTTRATASTTTTTTTTRRSPTRAPKQR 260
                                |.||||:....   ........|.||...|.:...|         
 Frog  1976 VAKIQNRTRMFTLQINKHLLALTMLPNDTSEKLHNAKELALSANASAAGTLSHIMR--------- 2031

  Fly   261 VDVDYGEGDGSDDYSYSYKSDMSVYDDVNNNQLNLRRNSKSQTYQQTSNTNTAKNRRKYPNVTSN 325
                      .::...:..|::|..:|.......|.::||...   .|..|..|......|:...
 Frog  2032 ----------FNEEVLNTTSELSKVNDTMQKTYKLLKDSKKTA---VSAGNKIKEVETQANILLE 2083

  Fly   326 KVQMHITRETNRLENIS---------AAEPAVVGAAMTTDRSTPTCNLDCGSDGICALEATAASS 381
            :::.....|.|...|:|         ..:.|.:..|::.||       ||               
 Frog  2084 RLKPLKLLEENLSRNLSEIKELISQARKQAASIKVAVSADR-------DC--------------- 2126

  Fly   382 RCLCPFGKTGNGCQEDIRAHVPRFAKRSWLAFPALHGAYKHVQLRIEFRPESFDGIILLSGERDD 446
                            :|::.|.....|:..            |.:..:....|.::...|..:.
 Frog  2127 ----------------VRSYKPEIYSTSFNT------------LTLNVKTSEPDNLLFYIGSSNK 2163

  Fly   447 LTGDFMALLLNKGFVEFWFDCGSGVGSVRSRE-TILLNEWNSVIIYRHRWDAWLVLNHGT-KVQG 509
            .| ||||:.:..|.|.|.:|.|||...:...: .|..|:|:.:.|.|..       ..|| ||:.
 Frog  2164 QT-DFMAVEMANGKVSFLWDLGSGTMRLEGPDLRINNNKWHKIDIERFG-------RSGTLKVEE 2220

  Fly   510 RSNGLFSRITFR-EP-------------VFLGGIGNITGLAKRLP--LAEGFAGCIRRFVANEHD 558
            .|:...|..|.. .|             :|:||:|   |..|:.|  |...|.||:.....|...
 Frog  2221 VSSSQKSASTTSVSPGTSAILHVDNSTLMFVGGLG---GQIKKSPAVLTTDFKGCMGEAFLNGKS 2282

  Fly   559 ---YKFTEHPLGDVINGFDIQDCSTDKCVRYPCQHGGKCLPSDQGAICLCPIGFVGDLCEIRMDL 620
               :.:.|.               ..||        |.|..|.|.                    
 Frog  2283 IGLWNYVER---------------KGKC--------GGCFSSPQE-------------------- 2304

  Fly   621 QVPAF----NGSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSGPEHRGDFIALYLNDGFVE 681
            :..||    :|.|.:.......:..|.:..: |..|   :||:||.......||:::.:.||.|.
 Frog  2305 EDNAFHFDGSGYSIVEKTLRSTATQIIIHFR-TFSP---NGLLLYLASNGTRDFLSVEIVDGKVR 2365

  Fly   682 FAFDLGSGPALVRSEHSLSLGQWHTIKISRTARLAVLKV-----------DKHQEVLTISSNGFW 735
            .:.:|||||.::.|:...:.|.|:.:...|..:..||.:           .|..|...::|:  .
 Frog  2366 VSVELGSGPLVLTSDERYNDGLWYKVAFHRNRKQGVLMIMDSYNSSNSRETKQGEAPGVASD--L 2428

  Fly   736 HLSLDQNLFVGGVNHVDRLPLDLKYKPFFVGCIQRIDINGHSLGIVAEALGGSNIGNCPHACVAR 800
            :.|....:::||:.....:...|..:. :||||:.::|:..:..::..|.|           |.:
 Frog  2429 NRSEKDPIYIGGLPRSRTVRRQLSSRS-YVGCIKNLEISRSNFNLLKNAYG-----------VRK 2481

  Fly   801 PC--GPLAECVPQMESYECRCSIHNERCNKAAEVPPEQLPELALHKSKVLET----KDNGEAAKK 859
            .|  .|:.........|                  .|.||...|.:|:::.:    .|.|..   
 Frog  2482 GCKLQPIRSITVLNNGY------------------VEMLPISLLPESEMMVSFSTLNDTGII--- 2525

  Fly   860 VSGLAHKKHSKKHRNLHKPTPATSTTTSTTSTTTTTTEAPSER--TEEATAGALSNEEIEDDIIF 922
            ::||......:..|..|.|..|...............:....|  ..::.:|:.|:.: |..||.
 Frog  2526 LAGLGKGTEKRIRRQAHLPFFAIMLINGHVEVHINAVDGAGTRKLLIKSPSGSYSDGQ-EHSIIL 2589

  Fly   923 ----RLVQQQQQQ---KELKKQHQQTTTTAPATSTTSSG--PSK-AKPRLSGKHHASKHEHHLKP 977
                |||..|..:   .|:|.......:.|..||:...|  ||| |.|.|.    .|:..:....
 Frog  2590 IRNKRLVSVQVDEGKPSEMKLNGPSVESAAINTSSFYVGGVPSKMAAPMLK----TSQSFYGCIR 2650

  Fly   978 NAA-------FTRKLSRLPTHYESFQTNPDSDILTFEDNNDWVTSLQQQEYGDAMAASQVPLAFE 1035
            |..       ||:.|.     ||  ..:.||.:||  :....:..:::||    :..:.:|    
 Frog  2651 NVILNMEQMDFTKVLM-----YE--HIHMDSCLLT--EKPKPIVQVEEQE----VQPTHIP---- 2698

  Fly  1036 DASPGTPRSSDNNEDDENAFVFDESLFDASDGTEEYQRKQLAQDMKRIMSNSNAHSSHKKAEVQF 1100
             |.|.|.|                                                       :.
 Frog  2699 -ARPVTER-------------------------------------------------------KV 2707

  Fly  1101 PPQGSQE--VGTANEDTSQYSDDYNDDELLTPVMQGGEEVKLEQHTSSTPQTHTDWSLLKKFDLS 1163
            |....||  :..||....|.:|:...|.:                    |..|       :|.|:
 Frog  2708 PVTTVQETHITKANNKPVQCTDEMLPDHV--------------------PDAH-------QFGLT 2745

  Fly  1164 AEHQSQVQGVRKNFGACFAGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTT 1228
                              .||.....:|.:     .:...:.:.:.::|.:.:|:|.:...|...
 Frog  2746 ------------------TGSHIVLPFNQS-----TVRRKLSVQMTLRTFATSGLIYYMAHQNQV 2787

  Fly  1229 EEHDDYLSLGIEQGYLHFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRNSQEGYLEVDGRKTVTL 1293
                ||.:|.:.:|.|.|..|.|.|.. :..:...:|||.||.|......::|.:.|||:::|:.
 Frog  2788 ----DYAALQLVEGKLFFLLDTGKGRT-VTSHSADISDGKWHTVTTEYIKRKGTITVDGQESVSA 2847

  Fly  1294 RAPGKLRQLNTDTGLYVGGMP------DVGYFTHQRYFSGIVGCISEIVLAGEMKLNFD 1346
            .|||....|:.:..||:||:|      ::|..||     .|..|||.|:: ...||..|
 Frog  2848 SAPGDSSTLDVEGKLYLGGLPLDYTAKNLGNVTH-----SIPACISNIMI-NSKKLQKD 2900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251
LamG 404..555 CDD:238058 40/168 (24%)
EGF 583..612 CDD:394967 5/28 (18%)
LamG 625..774 CDD:238058 37/163 (23%)
LamG 1205..1340 CDD:214598 41/140 (29%)
lama1XP_004915294.2 LamNT 16..268 CDD:214532
EGF_Lam 270..317 CDD:238012
Laminin_EGF 397..454 CDD:395007
Laminin_EGF 452..498 CDD:395007
Laminin_B 566..705 CDD:459652
EGF_Lam 739..787 CDD:238012
Laminin_EGF 789..844 CDD:395007
Laminin_EGF 847..891 CDD:395007
EGF_Lam 899..947 CDD:238012
EGF_Lam 949..993 CDD:214543
EGF_Lam 995..1039 CDD:238012
Laminin_EGF 1042..1090 CDD:395007
Laminin_EGF 1088..1145 CDD:395007
Laminin_B 1216..1358 CDD:459652
Laminin_EGF 1401..1447 CDD:395007
Laminin_EGF 1450..1504 CDD:395007
Laminin_EGF 1507..>1541 CDD:395007
Laminin_I 1575..1826 CDD:310534
Mplasa_alph_rch <1906..>2108 CDD:275316 39/218 (18%)
Laminin_II 2035..2145 CDD:368703 24/162 (15%)
LamG 2141..2281 CDD:214598 40/162 (25%)
LamG 2308..2465 CDD:238058 38/163 (23%)
LamG 2490..2655 CDD:238058 38/190 (20%)
Laminin_G_1 2770..2898 CDD:395008 42/138 (30%)
LamG 2918..3071 CDD:238058
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.