DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP2353 and lamb3

DIOPT Version :10

Sequence 1:NP_611082.2 Gene:SP2353 / 36771 FlyBaseID:FBgn0034070 Length:1361 Species:Drosophila melanogaster
Sequence 2:XP_012826649.2 Gene:lamb3 / 100125073 XenbaseID:XB-GENE-983491 Length:1157 Species:Xenopus tropicalis


Alignment Length:969 Identity:169/969 - (17%)
Similarity:266/969 - (27%) Gaps:384/969 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 LNHGTKVQGRSNGLFSRITFREPVFLGGIGNITGLAKRLPLAEGFAGCIRRFVANEHDYKFTEHP 565
            |:|..:||..::....|:.|.:.|             |||        .||:......|..    
 Frog   198 LSHSQRVQHLADFTNLRLNFTQLV-------------RLP--------PRRYREPSTFYSV---- 237

  Fly   566 LGDV--INGFDIQDCSTDKCVRYPCQHGGKCLPSDQGAI-------------CLCPIGFVGDLCE 615
              ||  ::|         .|..|  .|..:|:||  ||:             |:|....||:.||
 Frog   238 --DVMRVHG---------SCFCY--GHADRCMPS--GALDRDHYGDIQVYDKCICQHNTVGENCE 287

  Fly   616 IRMDLQVPAFNGSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSGPEHRGDFIALYLNDGFV 680
            ...||    |:.   |.:.|..|:                     |.....|.:     .|:...
 Frog   288 RCADL----FHD---LPWRPADDN---------------------YPNECRRCN-----CNNHAD 319

  Fly   681 EFAFDLGSGPALVRSEHSLSLGQWHTIKISRTARLAVLKVDKHQEVLTISSNGFWHLSLDQNLFV 745
            :..||    ||:..:...:|.|.....:...|.|                               
 Frog   320 KCHFD----PAVYEASGRVSGGVCDNCRDGTTGR------------------------------- 349

  Fly   746 GGVNHVDRLPLDLKYKP----------FFVGCIQRIDINGHSLGIVA------EALGGSNIGNC- 793
                :.:|...|....|          ....|.....|:|.|...:.      |.:||.....| 
 Frog   350 ----NCERCRSDYYRNPNKDMSHRDACISCDCDPEGSIDGGSCDDLTGRCNCKENVGGERCDQCK 410

  Fly   794 ----------PHACVARPCGP--------------LAECVPQMESYEC----------------- 817
                      |..|....|.|              ..:|:|.:....|                 
 Frog   411 PGYYLLSASNPQGCTKCTCNPQGMERDQPCDSETGQCKCLPNVLGQRCDQCATNHWNLASGRGCE 475

  Fly   818 RCSIH-----NERCNKA---------------AEVPPEQLPELA-------LHKSKVLE---TKD 852
            ||..|     :.:||:|               .|.|......|.       ......||   .|.
 Frog   476 RCGCHPRNSYSLQCNQATGQCLCREGFGGRFCTECPDRMYGSLQTGCRACNCDFQGTLEQGCDKA 540

  Fly   853 NGEAAKK--VSGL---------------AHKKHSKKHRNLHKPTPATSTTTSTTSTTT------- 893
            ||....:  ::|:               ....|...|...|:.....|.|.|..:.||       
 Frog   541 NGRCLCRPGITGVRCDSCQRGYSDPFPTCRACHQCFHFYDHEINALRSHTQSLLNMTTGQGQDSD 605

  Fly   894 -------TTTEAPSERTEEATAGALSNEEIEDDIIFRLVQQQQQQKELKKQHQQTTTTAPATSTT 951
                   ...||..:|.:..:.|.    .|.|:   .|.:.:.:...::...||..|..|.    
 Frog   606 LGLGPRMAAVEAALQRVQRISTGT----PIPDN---ELSRAESKLSRMRGDAQQLNTNLPE---- 659

  Fly   952 SSGPSKAKPRLSGKHHA-------------SKHEHH------------LKPNAAFTRKLS----- 986
               |....| ||...|:             ||.|.|            :..|:|:...|.     
 Frog   660 ---PESFAP-LSNNIHSLRGQFNRINLLYQSKKEQHSSSISNDASGIFMAVNSAYQSSLESAKSI 720

  Fly   987 --------------RLPTHYESFQTNPDSDILTFED----------------------------- 1008
                          |:....|...|...:|:.|.::                             
 Frog   721 AAAEGVLSQSKDSRRVALGLEGKSTELLADLETLKEELSYPNLTPTINRICEGVRIDPCTPEECP 785

  Fly  1009 ------NNDWVTSLQQQEYGDAMAASQVPLAFEDASPGTPRSSD-----NNEDDENAFVFDESLF 1062
                  ||:.:..:      .::.....||: .:|...|.::|.     ||:..:||.:..    
 Frog   786 GPVCQRNNNSLCKV------GSLCRGAFPLS-SNALRNTEKTSQDLQDINNKLQKNALMIQ---- 839

  Fly  1063 DASDGTEEYQ--RKQLAQDMKRIMSNSNAHSSHKKAEVQ----FPPQGSQEVGTANEDTSQYSDD 1121
            ||.....:.|  .|||.:.:.|..|.......|.:..:|    |..:.|.:..|..| .|:|...
 Frog   840 DAEKTASQIQDNAKQLTEQVSRARSRMEEDMGHSRQFIQQVRDFLTEPSTDPATIQE-VSEYILS 903

  Fly  1122 YNDDELLTPVMQGGEEV-----KLEQHTSSTPQTHTDWSLLKKFDLSAE--------HQSQVQGV 1173
            .......:.:::...|:     ||....|...||..|.:..||....||        .:..|.||
 Frog   904 LKLPTDASSILRKMNEIRSIAGKLPNIDSVLSQTKDDIAKAKKLQSEAELARNKAKDVEDGVDGV 968

  Fly  1174 RKNFGACFAGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHD 1232
            ..|.      |.:.....:|:...:..|.|:. .::.:.| |...:|....:|.|:.||
 Frog   969 IMNL------SQAKTALQEAEDKIRGSSSSLQ-QIQNRMH-EIEEVLSPAERGLTDMHD 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP2353NP_611082.2 FXa_inhibition 53..82 CDD:464251
LamG 404..555 CDD:238058 12/53 (23%)
EGF 583..612 CDD:394967 11/41 (27%)
LamG 625..774 CDD:238058 19/158 (12%)
LamG 1205..1340 CDD:214598 7/28 (25%)
lamb3XP_012826649.2 Laminin_N 25..244 CDD:459653 15/72 (21%)
EGF_Lam 245..302 CDD:238012 19/67 (28%)
EGF_Lam 311..369 CDD:238012 13/101 (13%)
Laminin_EGF 375..424 CDD:395007 9/48 (19%)
Laminin_EGF 427..474 CDD:395007 5/46 (11%)
Laminin_EGF 477..525 CDD:395007 8/47 (17%)
EGF_Lam 525..569 CDD:214543 6/43 (14%)
SMC_N <844..1148 CDD:481474 40/185 (22%)
cc_LAMB3_C 1087..1157 CDD:411974
Blue background indicates that the domain is not in the aligned region.

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