DRSC/TRiP Functional Genomics Resources

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Protein Alignment casp and AT4G00752

DIOPT Version :10

Sequence 1:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_680549.3 Gene:AT4G00752 / 825947 AraportID:AT4G00752 Length:469 Species:Arabidopsis thaliana


Alignment Length:499 Identity:98/499 - (19%)
Similarity:173/499 - (34%) Gaps:152/499 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 GLSHRFAVRSTE---RSAPTNSNQH------NAFDVVTVDSESSTDEFEDATDFNNAEYIFTDS- 352
            |.|...|::..|   .:.|...|.|      :.:|..::|:.|..:..||......:|....:. 
plant    17 GASESLAIQRLEEHGNNLPEAINAHFRDVERSIYDDSSLDTRSDYNVVEDNNHVRGSETRPVNES 81

  Fly   353 ---PPAQP----------PNRHLIPNDTDD---EISGSTQFVENYKARYGEPCPEFFVGSLENAK 401
               |.|.|          |:..|.||...:   ::|||        |..|.|.|....|.:....
plant    82 RPVPGALPSILSAARAFRPSLLLDPNYRRNILRQLSGS--------ALSGSPSPSSHTGEVTGFP 138

  Fly   402 QLACLRSAKERK--LLAI---YLHHGKSILSNVFCDQLMKHESIIQTFKEKFVLYGWDMTYESNK 461
            ..:...:...|.  |.|:   |..|..|..|.|........:|.:.             :.::.:
plant   139 AHSTWGNDHTRPPGLGAVGDGYARHSPSYGSQVHGGTHRDADSPVH-------------SNDAEE 190

  Fly   462 DMFLSSLTACIS--SNASLTARNIKLDKLPAIMLVGKSRQLGSNCEVLSVIHGNIGLDDLLTRLI 524
            :|..:::.|...  ....|..| ..||..|:.:|        |..||:     |...:|:...:.
plant   191 EMIRAAIEASKKDFQEGRLNTR-YSLDNNPSSVL--------SPREVI-----NREDEDIARAIS 241

  Fly   525 ETCEMFEEQLQVEIRQEDERAARDQVKAE---QDMAYQETLQA----------------DMAKDA 570
            .:.||          :|.|...|||: ||   |.:.:.:..|:                |..:| 
plant   242 MSLEM----------EEHESVLRDQL-AEFMPQSVEHHDPCQSNTNESTRYQPGSSSVQDNRED- 294

  Fly   571 AKRQKEAAQLAERKRMESERAE------------------------------------------- 592
             ..||:....:.:.|.:.:.:|                                           
plant   295 -MNQKQPINSSSQHRHDLQNSEGSYPEEWGGIPSKELQEAIMLEKAIFGGVANESASHNNQLGIH 358

  Fly   593 EDARRESIRLVAQQ-----SLPQEPSEQETGTSKIRVRKPTGDFLERRFFINNNLQDLLNFVTAN 652
            ::::..:.|:|.::     :||.|||.:......:.||.|......|||..::.|:.|.:|:.|.
plant   359 KESQSPNQRVVREEPERKAALPIEPSGENEDAITLLVRMPDSSRHGRRFLKSDKLKYLFDFIDAA 423

  Fly   653 GFLIE--EYKLISSWPRRDLTAIESSQTLESLKL-YPQETVILE 693
            | |::  .|:::..:|||..:..:.:.|.|.|.| ..||.:.||
plant   424 G-LVKPGTYRVVRPYPRRAFSIQDGALTFEELSLTNKQEALFLE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596
Ubl1_FAF1 140..215 CDD:340649
Ubl2_FAF1 236..308 CDD:340650 3/9 (33%)
UAS_FAF1 392..530 CDD:239288 24/144 (17%)
tolA <531..>600 CDD:236545 15/130 (12%)
UBX_UBXN3A 616..695 CDD:340469 24/81 (30%)
AT4G00752NP_680549.3 UBA_Ubx1_like 6..42 CDD:270536 6/24 (25%)
UBX 388..467 CDD:395637 24/80 (30%)
Blue background indicates that the domain is not in the aligned region.

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