DRSC/TRiP Functional Genomics Resources

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Protein Alignment casp and faf1

DIOPT Version :9

Sequence 1:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_998138.2 Gene:faf1 / 406243 ZFINID:ZDB-GENE-040426-2863 Length:675 Species:Danio rerio


Alignment Length:728 Identity:255/728 - (35%)
Similarity:384/728 - (52%) Gaps:97/728 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NKDEALTSFQSITGIDDVGEAFSHLEAADWNLVEALSRVIPHEDAPLTS-------------PH- 54
            :::..|..||:.||||::.||.:.||..:|:||.|::.|||.|:..|.|             || 
Zfish     8 DREMILADFQACTGIDNIAEAITLLELNNWDLVAAINGVIPQENGILQSSFSSEASQTGPYGPHS 72

  Fly    55 ------PILVPEPPARNAVESTNGFRPPGFDEMPGTSNASGFFAAALQNQNQNLNLNQP--HIQQ 111
                  |  .|..|..:|.||.:.  .......|.:|::..|...            ||  ||.:
Zfish    73 QSEATAP--TPSAPPPSASESASA--SASSSSSPPSSSSPAFCPV------------QPSRHIVE 121

  Fly   112 RFPTSQLLAQLTSSINLDPASSQNNNQNVITFNIHFNQQLYQLRLPSEATVEQLKRKIFAETSVP 176
            |                        ...:::|.:.:.|:..::.|...:||.::|..:..|..||
Zfish   122 R------------------------QSRMLSFRVEYRQRSIEVVLEDASTVGEIKTILETELQVP 162

  Fly   177 VCRQAIRGWPPSKASDAQQLGTRLCNLDLSPENELILVDLTED--GFMDTEQDEVTQRV-DKDFT 238
            |.:..::||.....||:    |.|.:|.|...|.|.:  ||.|  ....|.|....|.: ::::.
Zfish   163 VSKMQLKGWKSGDVSDS----TVLRSLHLPKNNSLYV--LTPDIAPSASTSQSSAQQGLSNQNYL 221

  Fly   239 IFIQF-ESDPPLTLSLPGRMTVQEVKMNVFDIKSIPVRHQEWTGWP-NGCDNDTTLAQSGIGL-S 300
            :.|.. |:....:|:.|...|:||||.|:.|:.:||||||:|.||| :..|:..|||.|||.. .
Zfish   222 LVISHREAQRDYSLNFPASKTIQEVKRNISDLTNIPVRHQQWDGWPASATDDSMTLAISGISYPC 286

  Fly   301 HRFAVRSTERSAP--TNSNQHNAFDVVTVDSESSTDEFEDATDFN-NAEYIF---TDSPPAQPPN 359
            |...|  ..||:|  |........||..| |:|..|:||||.:|. :...||   :.|....|  
Zfish   287 HHLTV--CRRSSPALTVDQTDECTDVHMV-SDSEGDDFEDAPEFGVDESEIFGMGSSSCRKSP-- 346

  Fly   360 RHLIPNDTDDEISGSTQFVENYKARYGEPCPEFFVGSLENAKQLACLRSAKERKLLAIYLHHGKS 424
              ::|.::::|......|...:..|||:..|.|::||||.|.|.|....|::|||||||||:.:|
Zfish   347 --MMPENSENEGDALLHFTAEFSRRYGDCHPVFYIGSLEAASQEAFYGKARDRKLLAIYLHNDES 409

  Fly   425 ILSNVFCDQLMKHESIIQTFKEKFVLYGWDMTYESNKDMFLSSLTACISSNASLTARNIKLDKLP 489
            :||||||.|:|..:||:....:.|:.:.||:|.|:||...|:..|....|..:.|.|..|.|:.|
Zfish   410 VLSNVFCSQMMCADSIVSYLSQNFITWAWDVTKEANKARLLTMCTRHFGSVVAQTIRTYKTDQFP 474

  Fly   490 AIMLVGKSRQLGSNCEVLSVIHGNIGLDDLLTRLIETCEMFEEQLQVEIRQEDERAARDQVKAEQ 554
            .:::|...|.  || |||:||.||..:|:|:.||:...|:|..|.|.:|:.||||.||:.||.||
Zfish   475 LLLIVMGKRT--SN-EVLNVIQGNTTVDELMMRLMGAMEIFTAQQQEDIKDEDEREAREMVKREQ 536

  Fly   555 DMAYQETLQADMAKDAAKRQKEAAQLAERKRMESERAEEDARRESIRLVAQQSLPQEPSEQETG- 618
            |.||:.:|:||..|..|:.::||.|:    |.|..|.|::..||:|||..:|:||.||.| |.| 
Zfish   537 DEAYRVSLEADRKKREAQEREEAEQV----RQERIRKEQEEEREAIRLSLEQALPPEPKE-EGGE 596

  Fly   619 -TSKIRVRKPTGDFLERRFFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDLTAIESSQTLESL 682
             .||:|:|.|:|:||||||.....||.|.:||.:.|:..:|:||::::|||::|.::.:..|...
Zfish   597 PISKLRIRTPSGEFLERRFLGTCKLQVLFDFVASKGYPSDEFKLLTTFPRRNITQLDPAWNLVEA 661

  Fly   683 KLYPQETVILEER 695
            ||:||||:.||.:
Zfish   662 KLFPQETLFLEAK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596 15/31 (48%)
UBL 148..>182 CDD:176364 9/33 (27%)
UAS_FAF1 392..530 CDD:239288 60/137 (44%)
Faf1_UBX 616..695 CDD:176366 36/80 (45%)
faf1NP_998138.2 UBA_FAF1 16..48 CDD:270596 15/31 (48%)
UBL 134..196 CDD:176364 19/67 (28%)
UAS_FAF1 377..512 CDD:239288 60/137 (44%)
Faf1_UBX 595..674 CDD:176366 35/78 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594423
Domainoid 1 1.000 281 1.000 Domainoid score I1633
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5120
Inparanoid 1 1.050 369 1.000 Inparanoid score I2095
OMA 1 1.010 - - QHG49530
OrthoDB 1 1.010 - - D363568at33208
OrthoFinder 1 1.000 - - FOG0006030
OrthoInspector 1 1.000 - - oto40353
orthoMCL 1 0.900 - - OOG6_107273
Panther 1 1.100 - - LDO PTHR23322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2328
SonicParanoid 1 1.000 - - X5739
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.900

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