DRSC/TRiP Functional Genomics Resources

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Protein Alignment casp and Faf2

DIOPT Version :10

Sequence 1:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_477388.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster


Alignment Length:353 Identity:86/353 - (24%)
Similarity:163/353 - (46%) Gaps:59/353 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 DEISGSTQFVENYKARYGEPCPEFFVG----SLENAKQLACLRSAKERKLLAIYLHHGKSILSNV 429
            |.:....:|:..|..||.|. |.|:.|    :|.:|||        |.:.|.:|||...:...:|
  Fly   141 DPLGDVMKFIREYYERYPEH-PVFYQGTYAQALNDAKQ--------ELRFLIVYLHKDPAKNPDV 196

  Fly   430 --FCDQLMKHESIIQTFKEKFVLYGWDM-TYESNKDMFLSSLTACISSNASLTARNIKLDKLPAI 491
              ||...:...|:|.......:|:|.|: |.|..:.|  .|:|  :.|..::...:::.:::   
  Fly   197 ESFCRNTLSARSVIDYINTHTLLWGCDVATPEGYRVM--QSIT--VRSYPTMVMISLRANRM--- 254

  Fly   492 MLVGKSRQLGSNCEVLSVIHGNIGLDDLLTRLIETCEMFEEQLQVEIRQEDERAARDQVKAEQDM 556
            |:||:             ..|:...::||.||.......|..|........||.....::.:||.
  Fly   255 MIVGR-------------FEGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTLRRQQDE 306

  Fly   557 AYQETLQADMAKDAAKRQKE------AAQLAERKRMESERAEEDARRESIRLVAQQSLPQEPSEQ 615
            ||:::|.||..|: .:||:|      |.:..|:.|.:.|..:|:..|:.|.|..  .:|.||:..
  Fly   307 AYEQSLLADEEKE-RQRQRERDAVRQAEEAVEQARRDVELRKEEIARQKIELAT--LVPSEPAAD 368

  Fly   616 ETGTSKIRVRKPTGDFLERRFFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDL---------- 670
            ..|...:..:.|:|..|||||...:::.|:.:::..:....:|:::.:::|:|.|          
  Fly   369 AVGAIAVVFKLPSGTRLERRFNQTDSVLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLDAAG 433

  Fly   671 ---TAIES-SQTLESLKLYPQETVILEE 694
               ||.|: ::||:::.|..:|.:.:.:
  Fly   434 ETGTAKETLTKTLQAVGLKNREVLFVND 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596
Ubl1_FAF1 140..215 CDD:340649
Ubl2_FAF1 236..308 CDD:340650
UAS_FAF1 392..530 CDD:239288 33/144 (23%)
tolA <531..>600 CDD:236545 21/74 (28%)
UBX_UBXN3A 616..695 CDD:340469 20/93 (22%)
Faf2NP_477388.1 UBA_FAF2 12..49 CDD:270597
UAS_ETEA 163..280 CDD:239289 33/144 (23%)
PDCD7 267..>370 CDD:464979 30/105 (29%)
UBX_UBXN3B 373..461 CDD:340537 19/87 (22%)
Blue background indicates that the domain is not in the aligned region.

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