DRSC/TRiP Functional Genomics Resources

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Protein Alignment casp and dsc5

DIOPT Version :10

Sequence 1:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_588339.1 Gene:dsc5 / 2539260 PomBaseID:SPCC285.11 Length:427 Species:Schizosaccharomyces pombe


Alignment Length:368 Identity:86/368 - (23%)
Similarity:157/368 - (42%) Gaps:75/368 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 RHLIPNDTDDEISGSTQFVENYKARYGEPCPEFFV--GSLENAKQLACLRSAKERKLLAIYLHHG 422
            |.|.|.||      :.:.|:|.:.:||....:||.  |.:|     |..|..:...:..::....
pombe    98 RVLSPADT------ANKLVQNLEEQYGTEHIDFFTDGGYME-----ALTRIKRNYGVALLFFTSS 151

  Fly   423 KSILSNVFCDQLMKHESIIQTFKEKFVLYGWDMTYESNKDMFLSSLTACISSNASLTARNIKLDK 487
            |:..|..|...::.::.:.:....:.:|. |  |.:..:|            .|...:|.....|
pombe   152 KNDDSETFSRSVLMNQELKEFLNRRNILC-W--TGDVCED------------EAFRGSRQFHCTK 201

  Fly   488 LPAIMLVGKSRQLGSNCEVLSVIHGNIGLDDLLTRLIETCEMFEEQLQVEIRQEDERAARD---Q 549
            .|:.:||..|.|| |...|.:.:||.:....::|.|..........|:   |...||.||:   :
pombe   202 FPSAVLVMYSPQL-SELVVAAQLHGCLDSSSIITNLTNALAKHLPSLE---RFRSEREAREAARE 262

  Fly   550 VKAEQDMAYQETLQADMAKDAAKRQKEAAQLAERKRMESERAEED---ARRESIRLVAQQSLPQE 611
            ::.:||.||    ||.:|:|   |:::|...||.:|:..|:.|.:   .:::..|.....:||.|
pombe   263 LRRQQDNAY----QASLARD---RERQAFARAEEERLAKEKEEREIVQKKKKQYRAWLASNLPPE 320

  Fly   612 PSEQETGTSKIRVRKPTGDFLERRFFINNNLQDLLNFVTANGFLIEE------------------ 658
            ||.::. .:::.:|.|.|....|||..::.::.:.|:|....|..||                  
pombe   321 PSSEDE-PARLSIRFPDGSRAVRRFKKDDTVESVYNYVDYMLFEKEEPEEFGRATSSSNPVTPPS 384

  Fly   659 -------YKLISSWPRRDLTAIESSQTLESLK-LYPQETVILE 693
                   ::|.||.||   ..::.|..:.:.| ::|..||::|
pombe   385 DYKHDFHFQLYSSLPR---ALLKPSVAISTNKAIFPNGTVVVE 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596
Ubl1_FAF1 140..215 CDD:340649
Ubl2_FAF1 236..308 CDD:340650
UAS_FAF1 392..530 CDD:239288 28/139 (20%)
tolA <531..>600 CDD:236545 21/74 (28%)
UBX_UBXN3A 616..695 CDD:340469 22/104 (21%)
dsc5NP_588339.1 UAS 111..237 CDD:214737 30/146 (21%)
UBX 326..425 CDD:395637 22/103 (21%)
Blue background indicates that the domain is not in the aligned region.

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