DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment casp and Ubxn8

DIOPT Version :10

Sequence 1:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_848763.2 Gene:Ubxn8 / 108159 MGIID:1337129 Length:277 Species:Mus musculus


Alignment Length:190 Identity:50/190 - (26%)
Similarity:89/190 - (46%) Gaps:28/190 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   521 TRLIETCEMFEEQLQVEIRQEDER------------AARDQVKAEQDMAYQETLQADMAK---DA 570
            :|.||  .:.:.|.::::::.:||            |....::.::|..::.:.||....   :|
Mouse    96 SRYIE--NVLKPQQEMKLKKLEERFYQMTGETWKLTAGHRLLEGDEDSEFENSSQASFETINGEA 158

  Fly   571 AKRQKEAAQLAERKRMESERAEEDARRESIRLVAQQSLPQEPSEQETGTSKIRVRKPTGDFLERR 635
            |:||    .|.:.....|..|....|:|      ...||:||||.......:.:|.|.|..|.||
Mouse   159 ARRQ----NLPKFSTEISPAARPLLRKE------VPDLPEEPSETAEEVVTVALRCPNGRVLRRR 213

  Fly   636 FFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDLTAIESSQTLESLKLYPQETVILEER 695
            ||.:.|.|.||:::...|:....|:|.:|:|||.| .:|...:||.:.:.....:.:||:
Mouse   214 FFKSWNSQVLLDWMMKVGYHKSLYRLSNSFPRRAL-EVEGGSSLEDIGITVDTVLNVEEK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596
Ubl1_FAF1 140..215 CDD:340649
Ubl2_FAF1 236..308 CDD:340650
UAS_FAF1 392..530 CDD:239288 3/8 (38%)
tolA <531..>600 CDD:236545 16/83 (19%)
UBX_UBXN3A 616..695 CDD:340469 24/78 (31%)
Ubxn8NP_848763.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..89
UBX_UBXN8 196..271 CDD:340472 23/75 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.