DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment casp and ubxn8

DIOPT Version :10

Sequence 1:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster
Sequence 2:XP_002939305.1 Gene:ubxn8 / 100124948 XenbaseID:XB-GENE-946444 Length:274 Species:Xenopus tropicalis


Alignment Length:197 Identity:45/197 - (22%)
Similarity:90/197 - (45%) Gaps:30/197 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 EMFEEQLQVEIRQEDERAARDQVKAEQDMAYQETLQADMAKDA-AKRQK----EAAQLAE----- 582
            |...:|..:..:|:::.:.|..:.||..:..:|.|:....|:. .|.|:    :..:|.|     
 Frog    77 EKERQQKLLREKQQEQLSKRVNLHAENVLKPREELKLQKKKEKYGKTQRWTLSQGYRLGEAEEGV 141

  Fly   583 RKRMESERAEEDARRESI--RLVAQQ-----------------SLPQEPSEQETGTSKIRVRKPT 628
            .|..:|....|.|..|::  |.:.:|                 :||:||||...|...|.:|.|:
 Frog   142 NKCSDSAHGTESANNEALRKRKLPEQVTKPLPKDEQPKPRKVIALPEEPSEVGDGVITIVLRCPS 206

  Fly   629 GDFLERRFFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDLTAIESSQTLESLKLYPQETVILE 693
            |...:|||:.:...:.||:::...|:....|.:.|::||..| .:::..:||.:.:.....:.:|
 Frog   207 GRVFKRRFYTSCTSEVLLDWMKKLGYHPVIYTIYSTFPRCQL-ELKNGSSLEDIGILKDMVLNVE 270

  Fly   694 ER 695
            ::
 Frog   271 KK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596
Ubl1_FAF1 140..215 CDD:340649
Ubl2_FAF1 236..308 CDD:340650
UAS_FAF1 392..530 CDD:239288 1/1 (100%)
tolA <531..>600 CDD:236545 17/78 (22%)
UBX_UBXN3A 616..695 CDD:340469 19/78 (24%)
ubxn8XP_002939305.1 UBX_UBXN8 196..271 CDD:340472 18/75 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.