DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8399 and AT5G54830

DIOPT Version :9

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_200294.1 Gene:AT5G54830 / 835573 AraportID:AT5G54830 Length:907 Species:Arabidopsis thaliana


Alignment Length:716 Identity:136/716 - (18%)
Similarity:237/716 - (33%) Gaps:198/716 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SLPQGAPETVC-DTMLPFHSGGSVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGGY- 92
            |:.:|....|| ||:  :....||       ..||..:....|.    |:|      |:||..| 
plant   257 SVKEGTATGVCPDTV--YEEADSV-------GSSVNNTKLVYGH----RID------GVSFVRYR 302

  Fly    93 --MIQARNR--------------------NPPHQIIGQFGPARDGTIKLMNCENSVNNSATHSN- 134
              :..:.|:                    .||..|...:.|...|.::..|..:...|.:.|.: 
plant   303 RPLNDSDNKFDFPVNSTESLTVIWALGVIKPPDVINPYYLPVNHGGVESENFGHFSLNLSDHVDE 367

  Fly   135 -AGP-------KQQVILEWQSPVDFLGQVVFNATIAQSYNEFWVGVPSQPVQIVRRDLSAAPPLP 191
             .||       .|.||:     .|....:|..|..:..|..     |..|.:::..:...||.|.
plant   368 CLGPLDADNKYDQDVII-----ADAHAPLVVTAGPSVHYPN-----PPNPSKVLYINKKEAPVLK 422

  Fly   192 TQSP-----SAPAGTTRAPYVPPSYVAPNNVVAVSSDPIYNGCGQSKNCFGFP------------ 239
            .:..     |..||...:.|:...::..|..:...::.||.|..::......|            
plant   423 VERGVPVKFSIEAGHDVSFYITSDFLGGNASLRNRTETIYAGGQETHGVLSSPSELVWAPNRNTP 487

  Fly   240 --------------------DGCVATKSCTSITV--------VTVRGDVFEFEIQSGKGTNAAYV 276
                                ||.::.....|:.:        .|:.||......:..|  .:.|:
plant   488 DQLYYHSIFQEKMGWKVQVVDGGLSDMYNNSVNLDDQQVKFFWTIVGDSISIAARGEK--KSGYL 550

  Fly   277 AVGLSDDAKMGDDLTTECV-------PENGRVNLY----SSLTSASPYSAVRSNVNQNSARLLDA 330
            |:|      .|.::|....       ...|.||.|    .|.::..|.:...:.|...|.     
plant   551 AIG------FGSEMTNSYAYIGWFDRNGTGHVNTYWIDGESASAVHPTTENMTYVRCKSE----- 604

  Fly   331 SIVDGVIYCRV-----------QRDAVTNVQGRTFDLRNGKYHLLVASGSSLKENSVGYHDIGRL 384
               :|:|....           .|....|:...|..|:     ::.|.|:...:..:...::..:
plant   605 ---EGIITLEFTRPLKPSCSHRDRPECKNMIDPTTPLK-----VIWAMGAKWTDGQLTERNMHSV 661

  Fly   385 PSAQPINL------AEV-QDLSGSSRLLIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQSCG 442
            .|.:|:.:      ||. |||    |.::.:||..|..||......||:.|||.|.       ..
plant   662 TSQRPVRVMLTRGSAEADQDL----RPVLGVHGFMMFLAWGILLPGGILSARYLKH-------IK 715

  Fly   443 TDQWFAWHRLLMVTTWSLTVAAYVLIWVELKQAVWHA-HSIIGLITVILCFIQPIGALFRPGPN- 505
            .|.||..|..|..:..::.....:....||....:.: |...|...::|...||:.|..||... 
plant   716 GDGWFKIHMYLQCSGLAIVFLGLLFAVAELNGFSFSSTHVKFGFTAIVLACAQPVNAWLRPAKPA 780

  Fly   506 -----DKKRPYFNWGHWLGGNLAHILGIVTIFFSVK-LPKAELPEWMD--------WILVSFVVV 556
                 ..||..:.:.|.:.|..|.::|:|.:|..:| |.:....|.:|        |:   |:.|
plant   781 QGELISSKRLIWEYSHSIVGQSAVVVGVVALFTGMKHLGERNGTENVDGLNLALGLWV---FLCV 842

  Fly   557 HVLVHLIF-------SIGLCLNHWQIGGMASERHLSQRANTFQMGDMSHHQQHAMRNGMSMERKM 614
            ..:.:|.:       :..|...:|.:|.:..:..:....:.....|.....    |||..||.::
plant   843 VTVAYLEYRERGRRRARNLSRGNWVLGNVEEDDSIDLIDSRGGFRDKDDED----RNGGRMEIQL 903

  Fly   615 D 615
            :
plant   904 E 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:280232 32/162 (20%)
DOMON_SDR_2_like 223..392 CDD:187686 34/230 (15%)
Cyt_b561_FRRS1_like 358..553 CDD:176490 49/217 (23%)
AT5G54830NP_200294.1 DM13 42..145 CDD:128929
DoH 183..358 CDD:214768 24/119 (20%)
DoH 523..674 CDD:214768 27/171 (16%)
Cyt_b561_FRRS1_like 682..850 CDD:176490 44/181 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4293
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D599276at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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